Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq62 105 2e-17 >seq62 Length=3011317 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| || |||||||| || || |||||||| ||||| || ||| ||| ||| Sbjct 734964 CAGATATTCGTGAAGACGCTCACGGGCAAGACGATCACGTTGGAGGTCGAATCTTCGGAC 734905 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| ||| ||| || Sbjct 734904 ACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCGCCAGACCAACAG 734845 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| |||| || || | || | | ||||||||| || Sbjct 734844 CGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGGCGCACGCTCTCGGATTACAACATC 734785 Query 206353 CAGAAAGAGTCTACTCTTCACCT 206375 ||||||||| || ||||| || Sbjct 734784 CAGAAAGAGAGCACGCTTCATCT 734762 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||| | || || || || ||||| | || || || || || Sbjct 735528 CAGATCTTCGTCAAGACGTTGACGGGCAAGACTATCACCCTCGAGGTCGAGTCGTCGGAT 735469 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || ||| ||| ||| ||| Sbjct 735468 ACCATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGCATTCCGCCTGACCAGCAA 735409 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| ||||| |||| ||||| | || ||| | || |||||| | Sbjct 735408 CGTCTTATCTTCGCCGGTAAGCAACTGGAGGATGGTCGCACCTTGTCGGACTACAACATT 735349 Query 206353 CAGAAAGAGTCTACTCTTCACCT 206375 ||||| ||||| || |||||||| Sbjct 735348 CAGAAGGAGTCAACGCTTCACCT 735326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818710393098