Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq62 138 1e-27 >seq62 Length=3011317 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| ||||||| |||| ||||| | |||||||| ||||| | || |||||| Sbjct 1922496 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAG 1922555 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 |||||||||||||||||||| || || || |||||||| || ||| | ||||| Sbjct 1922556 TGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCG-AGCCC 1922614 Query 147352 GC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410 | | || ||| ||||| |||||||| ||||||| || || ||||| || || Sbjct 1922615 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCCTTCGCCGA 1922674 Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 ||||| ||| | ||| ||| | || || | |||||| || |||||||| Sbjct 1922675 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTC 1922722 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| ||||||| |||| ||||| | |||||||| ||||| | || |||||| Sbjct 1913228 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAG 1913169 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 |||||||||||||||||||| || || || |||||||| || ||| | ||||| Sbjct 1913168 TGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCG-AGCCC 1913110 Query 147352 GC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410 | | || ||| ||||| |||||||| ||||||| || || || || || || Sbjct 1913109 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCTTTCGCCGA 1913050 Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 ||||| ||| | ||| ||| | || || | |||||| || |||||||| Sbjct 1913049 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTC 1913002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583486993483200