Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq51 298 8e-75 seq106 93.3 6e-13 seq1 93.3 6e-13 >seq51 Length=3165537 Score = 298 bits (330), Expect = 8e-75 Identities = 421/577 (73%), Gaps = 22/577 (4%) Strand=Plus/Minus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802 ||||| ||||| |||||||||| ||||| || ||| | |||||| |||||||| || Sbjct 1580121 CGCTTCGTCCTCTTCCCCATCCAATACCACGAAATCTGGCAGATGTAC-AAAAAGGCTGA 1580063 Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGT- 1455861 ||||||||| ||||| || |||||| | || || | ||| | ||||| Sbjct 1580062 GGCCTCCTTCTGGACGGCGGAGGAGATGGATCTGTCCAAGGACCTCCACGACTGGAACAA 1580003 Query 1455862 -CGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCA 1455919 ||| | | |||||| ||||| || |||||| |||||||||||||| || ||| || Sbjct 1580002 CCGCCTCAACGACGATGAGCGTCACTTCATCTCCCACGTCCTCGCCTTCTT-CGCTGCGT 1579944 Query 1455920 GCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAG 1455979 |||||| ||||| ||||||||| | || || || || |||||||| | | Sbjct 1579943 CCGATGGTATCGTCAACGAGAACCTCGTCGAGCGTTTCTCCAACGAGGTCCAGGCCGCGG 1579884 Query 1455980 AGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACT 1456039 ||||||| | || ||||| ||||| ||| || || ||||| ||||| || ||||||| Sbjct 1579883 AGGCACGCTGCTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCCGAGACCTACT 1579824 Query 1456040 CGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAG---GACCACCTCTTTCGCG 1456096 | ||||| |||||||||||| |||||||||| || || || || ||||||| | Sbjct 1579823 CCCTCCTCATCGACACCTACATCAAGGACCC--TC-AGCAGCGCGAATACCTCTTCGATG 1579767 Query 1456097 CCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA--- 1456153 |||| |||||| | || | | | ||| |||||||||||||| | ||||||| Sbjct 1579766 CCATTGACACGATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTCTTCGTTGGATCAGCG 1579707 Query 1456154 ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCAT 1456212 ||||||||| | | |||||| ||||| ||||||| |||||||| ||||||||| || Sbjct 1579706 ACAAGGAGG---TTG--CCTTTGCGGAGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGTAT 1579652 Query 1456213 CTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||| ||||||||| ||| | ||||||| ||||| |||||||| ||||||||| |||| Sbjct 1579651 CTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTCATG-CCGG 1579593 Query 1456273 TCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 || || ||| |||||| | ||| ||| ||||| Sbjct 1579592 TC-TCACCTTCTCCAACGAGCTCATCTCTCGTGACGA 1579557 Score = 203 bits (224), Expect = 5e-46 Identities = 378/541 (70%), Gaps = 13/541 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| | |||||| | || || || |||| |||||||| | |||||| | |||| Sbjct 1581364 GATATGGCAGATGTACAAGCGAGCCCAAG-CCTCGTTTTGGACAGTGGAGGAGATTGACC 1581422 Query 1455835 TCGGCGC-CGACACGGTCCACTGG---GTGTCGCTGAGCGACGACGAGCGCCATTTCATC 1455890 || ||| |||| ||||| | | || | | ||||||| |||||| | Sbjct 1581423 TCT-CGCACGACCTCTGGGACTGGAACGGGAGACTCACCCCAAACGAGCGGCATTTCCTG 1581481 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 | ||||||||||| || ||||||| || || |||||| ||||||||| | || Sbjct 1581482 TCCTATGTCCTCGCCTTCTT-CGCCGCCTCAGACGGTATCGTGAACGAGAACCTTGTCGA 1581540 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 || || ||| || ||||| | ||||| || | || ||||| || ||||| Sbjct 1581541 GCGGTTCTCGAATGAAGTCCAGGCCGCGGAGGCCCGCTGCTTCTACGGCTTTCAGATAAT 1581600 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 ||||||||| | |||||||| ||||| || ||||| || ||||||||| ||||||| || Sbjct 1581601 GATCGAAAACGTGCACTCTGAGACCTATTCCCTCCTCATTGACACCTACATCAAGGATCC 1581660 Query 1456071 GGTCGAGAAGGACCA-CCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129 | |||| | ||| |||||| ||||||||| || | || | | | ||| |||| Sbjct 1581661 CGCCGAGC-GTACCTTCCTCTTCGACGCCATCGAGACCATCCCATGCATCAAGAAGAAGG 1581719 Query 1456130 CCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 | |||||||| | ||||| | ||| || || | || || ||||||||||| Sbjct 1581720 CAGACTGGGCACTCCGCTGGATATCTGACGAGCGC-TC-AGTGTTCGCTGAGCGGCTCGT 1581777 Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 | ||| ||||| |||||||| ||||| ||||| || ||| | ||||||| ||| | Sbjct 1581778 TGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCATTCGCCTCCATCTTCTGGAT 1581837 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACG 1456308 |||||||||||| || |||||||| | || ||| ||||| | ||||| ||||||| Sbjct 1581838 CAAGAAGCGCGGGCTAATGCCCGG-CCTCACATTTTCGAACGAGCTCATCAGCCGCGACG 1581896 Query 1456309 A 1456309 | Sbjct 1581897 A 1581897 Score = 150 bits (166), Expect = 3e-30 Identities = 154/196 (79%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639 |||||||||||||||||| ||| |||||||||||||||||| || || |||||||||| Sbjct 1579371 GCGCTCATCGGCATGAACTCCAA-GCTCATGTGCCAGTACATCGAGTTC-GTCGCCGACC 1579314 Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699 | || |||| || ||||| || |||||| ||||| | | ||||| ||| | Sbjct 1579313 GTCTACTCGTTGCCCTCGG-TGACGAGAAGTACTACGGCGTCACGAACCCCTTCGACTTC 1579255 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTAC 1456758 ||||| ||||||||||| |||||||||| ||||| |||||| ||||| | |||||| Sbjct 1579254 ATGGACATGATCTCGCTCCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTATCGGAGTAC 1579195 Query 1456759 GCCAAGGCCGGCGTCA 1456774 |||||||||| |||| Sbjct 1579194 TCCAAGGCCGGTGTCA 1579179 Score = 107 bits (118), Expect = 3e-17 Identities = 153/210 (73%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624 ||| | || ||||| ||||||| |||||||||||| | | | ||||| || ||||| | Sbjct 1582076 GAGGCTCTACCGGTATCGCTCATAGGCATGAACGCC-CAGTTGATGTGTCAATACATCG- 1582133 Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC 1456684 | || || |||||||| ||||| | ||||| || || ||||||||| || | Sbjct 1582134 AGTTCGTGGCCGACCGACTGCTGGTCGCGCTTGG-AAATGACAAGCACTACAACGCGACG 1582192 Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGC 1456744 ||||||||| | ||||| |||| ||||| | |||||||| ||||| |||||| Sbjct 1582193 AACCCGTTCGACTTCATGGACATGATATCGCTGCAAGGCAAGACGAACTTCTTCGAGAAG 1582252 Query 1456745 CGCGTG-GCGAGTACGCCAAGGCCGGCGTC 1456773 |||||| |||||| || | ||| ||| || Sbjct 1582253 CGCGTGTCCGAGTATGCTATGGCGGGCTTC 1582282 >seq106 Length=1787729 Score = 93.3 bits (102), Expect = 6e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 165749 GGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCG 165808 ||| ||||| ||| | |||||||| |||| ||||| || || ||| ||| || || || Sbjct 1687533 GGCCGACCTTGTCTCCTGGGGCGCGATCGGAGCGCGGACTACGGAGTCCCAAGTCCATCG 1687592 Query 165809 CGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864 || | ||||||||||| || |||||| ||||||||| ||| ||||||||||| Sbjct 1687593 TGAACTTACGTCGGCGCTGTCGATGCCCACTGGCTTCAAGAACTCCACCGACGGCA 1687648 >seq1 Length=3841264 Score = 93.3 bits (102), Expect = 6e-13 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 262420 CAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCGAA 262479 ||||||||| || | || |||| || |||| || | || |||||||| | ||| || Sbjct 3253669 CAACCTCAACCGCATCATCGACAAGAACTACTATCCCATCCCGGAGGCCCGTCGCTCCAA 3253610 Query 262480 TCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTT--TGCCCTG 262537 |||| ||||| ||||| ||||| || |||||||||||||| |||| ||| || || Sbjct 3253609 CATGCGTCATCGCCCGATCGGCGTTGGTGTGCAGGGCCTCGCTGACGCGTTCATGGCC-- 3253552 Query 262538 ATGGACCTGCCGTGGGAGAGCGCCGGCGCACGACGTCTCAACCGCGCCATCTTTGAGACG 262597 | | |||||| || |||| ||||| | ||||||| ||||| |||||| Sbjct 3253551 CTCCGCTTGCCGTTTGACTCGGCCGAAGCACGGAGGCTCAACCTTCAGATCTTCGAGACG 3253492 Query 262598 GTCTACCATGCGGC 262611 | |||||||| || Sbjct 3253491 ATTTACCATGCTGC 3253478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177797889646356