Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq62 131 2e-25 >seq2 Length=1429897 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| || || || | || ||||| |||||||||||||| Sbjct 256969 CTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCCGCAAA 256910 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||||||||||||||| |||| | |||||| ||| |||||| ||| | || Sbjct 256909 GATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTTTGCCTTGA-CGT 256851 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||| | |||||||| || || |||| ||| || | Sbjct 256850 TGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTCTTGA 256791 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 256790 CAAAGATCTGCAT 256778 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || |||| || |||||||| || || || Sbjct 256688 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 256629 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||||||| |||| || |||| || Sbjct 256628 GATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC-TTGGCTTTGACGT 256570 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | |||||||| || || |||| ||| || | Sbjct 256569 TGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAGTCTTGA 256510 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 256509 CAAAGATCTGCAT 256497 >seq62 Length=3011317 Score = 131 bits (144), Expect = 2e-25 Identities = 167/226 (74%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 ||| | ||| ||||| || || ||||||||||| | | || ||| |||| |||||||| Sbjct 734764 ATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTG 734823 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||| ||||| || || | ||||| ||||| | |||| | |||||| ||| ||||| Sbjct 734824 CTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTT 734883 Query 35653 TTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCG 35711 ||||| |||| | | |||||| ||||| ||||||| ||||||||| || |||| Sbjct 734884 CGCCTTCA-CGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCG 734942 Query 35712 TCAAAGTTTTCACAAATATCTGCAT-TCTGTGCGCACACACACCAC 35756 | | || ||||| ||||||||||| || ||||| || || ||| Sbjct 734943 TGAGCGTCTTCACGAATATCTGCATCCCTCCGCGCAGACGCAACAC 734988 Score = 105 bits (116), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | |||||| || | || ||||| |||||||| || || Sbjct 735340 CTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGTTGCTTACCGGCGAA 735399 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | |||| || ||||||||| ||||| ||| | || Sbjct 735400 GATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTGA-CGT 735458 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || ||| || ||||| | ||||| || || |||||||| || || | Sbjct 735459 TGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTCAACGTCTTGA 735518 Query 35724 CAAATATCTGCATTC 35738 | || |||||||||| Sbjct 735519 CGAAGATCTGCATTC 735533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792822381040