Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq62 120 3e-22 seq2 114 1e-20 seq35 89.7 5e-13 >seq62 Length=3011317 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCG 134564 ||||||| ||||| || ||||| ||||||||||||| || ||| |||| || || || Sbjct 735324 CGAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAA-GGTGCGACCATCCTCC 735382 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || || || || | ||| ||||| || ||||| ||||| || || |||||| Sbjct 735383 AGTTGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGA 735442 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || || ||||| || || ||||| || || || || Sbjct 735443 ATCTTCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTG 735502 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || || ||||| || |||||| Sbjct 735503 CCCGTCAACGTCTTGACGAAGATCTGCATT 735532 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || |||||||| ||||| |||||||| |||||||| ||||| ||||| | Sbjct 734969 CCTCCGCGCAGACGCAACACCAGGTGAAGCGTGGACTCCTTTTGGATGTTATAGTCCGAA 735028 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| || || || |||||||||||||| |||||||| || Sbjct 735029 AGGGTACGTCCATCTTCGAGCTGCTTCCCGGCGAAAATCAAACGCTGTTGATCGGGAGGG 735088 Query 134607 AT 134608 || Sbjct 735089 AT 735090 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| ||||||||||||||| | ||| || ||| ||| Sbjct 735551 ACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCCTCG 735610 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||||| ||||| || || ||||| ||||||||||| || || |||| Sbjct 735611 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGATCCGGGGGGATGC 735656 >seq2 Length=1429897 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || || || ||||| ||||||||||||||| || ||| || ||| |||||| Sbjct 256702 AGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGC 256643 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || || | |||||||| || ||||| ||||| || || || || || Sbjct 256642 TGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC 256583 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || |||||| ||| | || || || || || || ||||| || || || || || Sbjct 256582 TTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCA 256523 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || || || ||||| Sbjct 256522 GTCAGAGTCTTGACAAAGATCTGCAT 256497 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || || || || ||||| ||||||||||||||| | ||| | || || | Sbjct 256985 CGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCA 256926 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 | || || || ||||| ||||| |||||||| || || || || || || || || |||| Sbjct 256925 GTTGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAA 256866 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | ||| ||||| ||| | ||||| || || ||||| |||||||| || || || | Sbjct 256865 TCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGC 256806 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| | ||| || || || || ||||| Sbjct 256805 CGGTCAGAGTCTTGACAAAGATCTGCAT 256778 >seq35 Length=1232546 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || || || ||||| || ||||||||||||| Sbjct 1141433 CCACCACGGAGGCGGAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1141374 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| || || |||| |||||||||||||| || Sbjct 1141373 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCGGGGGGG 1141314 Query 134607 ATGC 134610 |||| Sbjct 1141313 ATGC 1141310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397528187760