Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq51 107 3e-18 >seq51 Length=3165537 Score = 107 bits (118), Expect = 3e-18 Identities = 172/245 (70%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 |||||||||||| || | ||||| || | || || | ||||| ||||||||||| Sbjct 1581921 CAGGCGAAGTCAGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAGG 1581862 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || |||||||| || ||||| |||| ||| || |||| || || || ||||| |||||| Sbjct 1581861 CCGGGCATTAGCCCGCGCTTCTTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAAG 1581802 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA-ACT--TGTATCATTATGT 39793 || || || || || || || ||||| || | ||| || | ||| || | | | Sbjct 1581801 ATACCCTCGACGGCGGCGAAGGCAACGAGCCGCTCAGCGAACACTGAGCGCTCGTCAGAT 1581742 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||| ||||||| || || |||||||| | || || || || || || || | Sbjct 1581741 ATCCAGCGGAGTGCCCAGTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTCG 1581682 Query 39854 AAGAG 39858 ||||| Sbjct 1581681 AAGAG 1581677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907615082320