Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq51 138 1e-27 seq117 84.2 3e-11 >seq51 Length=3165537 Score = 138 bits (152), Expect = 1e-27 Identities = 352/526 (67%), Gaps = 20/526 (4%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| ||| ||| | |||||||||||| |||||||| || || |||||| ||||| Sbjct 1579536 GCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACC- 1579594 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || |||||||||| |||||| || | || ||||| ||||||||||| Sbjct 1579595 GGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATA 1579654 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGGGACTTTGT-----A 130189 ||||| || || || || | ||||||||| ||||||| | | | |||| | Sbjct 1579655 CCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAAC--CTCCTTGTCGCTGA 1579712 Query 130190 TCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCT 130249 || ||| | | ||||| | ||||| |||| ||| || |||| || | || || Sbjct 1579713 TCCAACGA----AGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGCA 1579768 Query 130250 TCAAAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308 || ||||| | | | | |||| || || |||||||| | || ||||| || || Sbjct 1579769 TCGAAGAGGTATTCGCGCTGCTGA-GGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 1579827 Query 130309 TGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367 || ||| || | | | ||| ||| || || ||||||| |||| || || Sbjct 1579828 GGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAAC-CGTAGAAGCAGCGTGCCTCCG 1579886 Query 130368 TTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 130427 ||| ||||| | | ||| | || ||||| || || ||||||||| Sbjct 1579887 CGGCCTGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACG 1579946 Query 130428 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 130484 |||| || || || |||| | ||||| | | |||| ||||| | || | | Sbjct 1579947 CAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTCGTTGAGGCGGTTGT 1580006 Query 130485 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||||||| || ||||| || ||||| | ||||||||| ||||| Sbjct 1580007 TCCAGTCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCA 1580052 Score = 100 bits (110), Expect = 4e-16 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| ||| |||||| || ||||| || || || ||||| || || |||||| Sbjct 1581900 CCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAGGCCGGGCATTAGCCCGCGCTTC 1581841 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | ||||| |||||||||||||| ||||| || ||||| Sbjct 1581840 TTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAG 1581781 Query 130154 GCAAAGAGACGCTCAGCAAA---GGAGCGGGACTTTGTATCAAACCACTTCATCGCCCAC 130210 |||| ||| |||||||| || ||||| || | | ||| | ||||| Sbjct 1581780 GCAACGAGCCGCTCAGCGAACACTGAGCG---CTCGTCAGATATCCAGCGGAGTGCCCAG 1581724 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 | ||||| |||| ||| || |||| ||||| ||| || || ||||| Sbjct 1581723 TCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTCGAAGAG 1581677 >seq117 Length=1514007 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||| ||||| | ||| ||||| || || ||| || || || ||||||||||| Sbjct 682230 GTGTAGACCTTCGTCCCTGGAAATGAGCTCGTTGGAGTGACAGAGGCCAGGCATGAGACC 682171 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 || |||||| |||||| || ||| ||| ||| ||||| ||||| || || || Sbjct 682170 GCGGCTCTTCAGCCAGAATATGGCAGCAAAGGAGGATGAGAAAAAGATTCCTTCAACGGC 682111 Query 130147 CGCGAACGCAAAGA 130160 |||||||||| || Sbjct 682110 GGCGAACGCAATGA 682097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434133199280