Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq51 138 1e-27 >seq51 Length=3165537 Score = 138 bits (152), Expect = 1e-27 Identities = 128/161 (80%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| ||||| ||| |||| ||||| || ||||||||||||||||| || || | Sbjct 1579694 CCTTTGCGGAGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCTCGT 1579635 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | | || | ||||| |||||||| || |||||||| |||||| ||||||||||| Sbjct 1579634 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTCATGCC-GGTCTCACCTTCTCCAACG 1579576 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 |||| ||||||||||||||||| | ||| || |||||| Sbjct 1579575 AGCTCATCTCTCGTGACGAGGGTATGCACACGGACTTTGCG 1579535 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 || |||||||| ||| | || || || || ||||||||||||||||||||||| ||| Sbjct 1581761 TTCGCTGAGCGGCTCGTTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCATTC 1581820 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 | | || | ||| |||||||||| || || ||||| || ||| || || |||||| Sbjct 1581821 GCCTCCATCTTCTGGATCAAGAAGCGCGGGCTAATGCCCGGCCTCACATTTTCGAACGAG 1581880 Query 94918 CTTATCTCTCGTGACGAGGG 94937 || ||| || |||||||| Sbjct 1581881 CTCATCAGCCGCGACGAGGG 1581900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259793875120