Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq62 125 6e-24 >seq62 Length=3011317 Score = 125 bits (138), Expect = 6e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGAA 30246 ||||| || || ||| | |||| |||||| || | || |||| ||||| || || || Sbjct 1922496 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCA-GTCCTCGTACTTCGCGCCAAA 1922554 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 |||||||||||||| ||||| || || || ||||| || || | ||| ||| || Sbjct 1922555 GTGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCC 1922614 Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGA 30366 | ||| || | || || |||| ||||| ||||||| ||||| || |||||| | || Sbjct 1922615 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCCTTCGCCGA 1922674 Query 30367 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30419 ||||| || | || |||| | || | |||||||| || |||||||| |||| Sbjct 1922675 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGA 1922727 Score = 120 bits (132), Expect = 2e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGAA 30246 ||||| || || ||| | |||| |||||| || | || |||| ||||| || || || Sbjct 1913228 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCA-GTCCTCGTACTTCGCGCCAAA 1913170 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 |||||||||||||| ||||| || || || ||||| || || | ||| ||| || Sbjct 1913169 GTGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCC 1913110 Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGA 30366 | ||| || | || || |||| ||||| ||||||| ||||| || || ||| | || Sbjct 1913109 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCTTTCGCCGA 1913050 Query 30367 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30419 ||||| || | || |||| | || | |||||||| || |||||||| |||| Sbjct 1913049 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGA 1912997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309716636696