Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq62 129 5e-25 >seq62 Length=3011317 Score = 129 bits (142), Expect = 5e-25 Identities = 190/269 (71%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 |||||||| | |||| |||| |||||||| |||| || |||| ||| |||||| Sbjct 1922496 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAG 1922555 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCC 6973 || ||||||||||| |||||||| || || | |||||| || ||| || ||| Sbjct 1922556 TGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCCA 1922615 Query 6974 CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAG 7033 ||||| || || || || ||||||| ||||||| ||||| || ||| | |||| Sbjct 1922616 CGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCCTTCGCCGAG 1922675 Query 7034 AGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTC 7093 |||| ||| | || ||| || | ||||||||| || ||||||||||| | ||| Sbjct 1922676 AGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCCGCGG 1922735 Query 7094 CAGTACACACGTTTCGTCGTCAGCAGCGG 7122 | || ||| ||||| || ||||| || Sbjct 1922736 AGGAACGTACGCTTCGTGGTGAGCAGAGG 1922764 Score = 129 bits (142), Expect = 5e-25 Identities = 190/269 (71%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || ||||| || ||||| ||| || | ||| | ||||||||||| || |||||| Sbjct 1922764 CCTCTGCTCACCACGAAGCGTACGTTCCTCCGCGGCATCGTCGAGGAGCTCCTATGGTTC 1922705 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||| | || ||| || | ||| |||||||| | ||| || ||||| ||||||| Sbjct 1922704 GTGCGCGGATGCACAGACGCGAAGCAGCTCTCGGCGAAGGGCGTCAAGATATGGGACGGG 1922645 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTG 34402 ||||||| || || || || ||||| ||| || ||| || |||||| | Sbjct 1922644 AACGGGTCCAAGGAGTTCCTCGAGAAGCGTGGGCTCGGGCATCGACGCGAAGGCGACCTC 1922585 Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462 || || |||||||| ||||||||||| |||||||| ||| |||| || |||| ||| Sbjct 1922584 GGTCCCGTCTACGGCTTCCAGTGGAGGCACTTTGGCGCGAAGTACGAGGACTGCGACGCG 1922525 Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCT 34491 ||||| |||| |||| | |||||||| Sbjct 1922524 GACTACACGGGCAAGGGCGTCGACCAGCT 1922496 Score = 125 bits (138), Expect = 6e-24 Identities = 189/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || ||||| || ||||| ||| || | ||| | ||||||||||| || |||||| Sbjct 1912960 CCTCTGCTCACCACGAAGCGTACGTTCCTCCGCGGCATCGTCGAGGAGCTCCTATGGTTC 1913019 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||| | || ||| || | ||| |||||||| | || || ||||| ||||||| Sbjct 1913020 GTGCGCGGATGCACAGACGCGAAGCAGCTCTCGGCGAAAGGCGTCAAGATATGGGACGGG 1913079 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTG 34402 ||||||| || || || || ||||| ||| || ||| || |||||| | Sbjct 1913080 AACGGGTCCAAGGAGTTCCTCGAGAAGCGTGGGCTCGGGCATCGACGCGAAGGCGACCTC 1913139 Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462 || || |||||||| ||||||||||| |||||||| ||| |||| || |||| ||| Sbjct 1913140 GGTCCCGTCTACGGCTTCCAGTGGAGGCACTTTGGCGCGAAGTACGAGGACTGCGACGCG 1913199 Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCT 34491 ||||| |||| |||| | |||||||| Sbjct 1913200 GACTACACGGGCAAGGGCGTCGACCAGCT 1913228 Score = 125 bits (138), Expect = 6e-24 Identities = 189/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 |||||||| | |||| |||| |||||||| |||| || |||| ||| |||||| Sbjct 1913228 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAG 1913169 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCC 6973 || ||||||||||| |||||||| || || | |||||| || ||| || ||| Sbjct 1913168 TGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCCA 1913109 Query 6974 CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAG 7033 ||||| || || || || ||||||| ||||||| ||||| || || | |||| Sbjct 1913108 CGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCTTTCGCCGAG 1913049 Query 7034 AGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTC 7093 |||| ||| | || ||| || | ||||||||| || ||||||||||| | ||| Sbjct 1913048 AGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCCGCGG 1912989 Query 7094 CAGTACACACGTTTCGTCGTCAGCAGCGG 7122 | || ||| ||||| || ||||| || Sbjct 1912988 AGGAACGTACGCTTCGTGGTGAGCAGAGG 1912960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261626747360