Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 178 3e-39 seq62 174 4e-38 seq35 96.9 8e-15 seq13 86.0 1e-11 >seq2 Length=1429897 Score = 178 bits (196), Expect = 3e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||| ||| || |||||||||||||||| || || | ||||| Sbjct 257269 AGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCC 257210 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || || || || || | || ||||||||| Sbjct 257209 TCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCC 257150 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||| |||||||| || ||||| || ||||| ||| Sbjct 257149 TGGATCTTCGCCTTCACGTTATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTC 257090 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || |||||||| ||||| || || | ||||||| Sbjct 257089 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATT 257057 Score = 172 bits (190), Expect = 1e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| || || ||||| || || ||||| || || | ||| || | || || || | Sbjct 256704 CAAGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGA 256645 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| |||||||| ||||| || |||||||| || | || ||||||||||||| Sbjct 256644 GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGA 256585 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| ||| ||||| || ||||| || ||| || |||||||| ||||||||||| | Sbjct 256584 TCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGC 256525 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || |||||||| ||||| | |||||| Sbjct 256524 CAGTCAGAGTCTTGACAAAGATCTGCAT 256497 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| || ||||| || || ||||| || || | || || | ||||| ||||| Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGT 256924 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || ||||| | || || ||||| || |||| || ||||| ||||| ||| Sbjct 256923 TGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATC 256864 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 ||| || ||||| ||||||||||| || || |||||||||||||||||||| || Sbjct 256863 TTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCG 256804 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| | |||||| Sbjct 256803 GTCAGAGTCTTGACAAAGATCTGCAT 256778 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 |||||||| |||||||| || |||||||| || || | ||| || | || || || ||| Sbjct 256412 AGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCGAGC 256353 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||| |||||||| ||||| || || || ||||| Sbjct 256352 TGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGG 256315 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||||||||||||| || || || || ||||| || ||| || |||||| Sbjct 256248 CCCTCCTTGTCCTGGATCTTTGTCTTGACATTGTCAATGGTATCCGAGGACTCGACCTCG 256189 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || || || |||||||| || | |||||| Sbjct 256188 AGGGTGATGGTCTTGCCGGTAAGGGTCTTTACGAAGATCTGCAT 256145 >seq62 Length=3011317 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| ||| |||||| |||||||| ||||||| || || | || || |||||| Sbjct 734762 AGATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGC 734821 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| |||||||| ||||| |||||||| || |||| || ||||| ||||| ||| Sbjct 734822 TGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATC 734881 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || |||||||| ||||| ||||| || ||| ||||| | ||||||||||| ||| Sbjct 734882 TTCGCCTTCACGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCC 734941 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | |||||| Sbjct 734942 GTGAGCGTCTTCACGAATATCTGCAT 734967 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 |||||||| || ||||| || || ||||| || |||| | ||| | ||||| ||||| Sbjct 735326 AGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGT 735385 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || ||||||||||| ||||| |||||||| |||| || |||||||| || ||| Sbjct 735386 TGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATC 735445 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || ||||| |||||||| || || || |||||||| ||||| ||||| ||| Sbjct 735446 TTCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCC 735505 Query 211089 GTGAGAGTCTTTACAAACACCTGCATT 211115 || | ||||| || || | ||||||| Sbjct 735506 GTCAACGTCTTGACGAAGATCTGCATT 735532 Score = 105 bits (116), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || |||||||| |||||||| |||||||||||||| |||| |||||| | ||||||||| Sbjct 734987 ACCAGGTGAAGCGTGGACTCCTTTTGGATGTTATAGTCCGAAAGGGTACGTCCATCTTCG 735046 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||| || ||||| || | || ||||| || ||||| Sbjct 735047 AGCTGCTTCCCGGCGAAAATCAAACGCTGTTGATCGGGAGG 735087 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || || || ||||||||||| ||||| || |||||| Sbjct 735709 CCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACCTCG 735768 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| |||||||| || | ||| || || || | |||||| || Sbjct 735769 AGAGTGATGGTCTTTCCGGTCAAAGTTTTCACGAAAATCTGCATGTT 735815 >seq35 Length=1232546 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||| |||||| || || || ||||||||||| ||| || ||||| Sbjct 1141254 CCCTCCTTGTCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCA 1141195 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTT 211116 || ||||| ||||| |||||||| |||||||| || | |||||||| Sbjct 1141194 AGGGTGATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCATTT 1141149 >seq13 Length=1377620 Score = 86.0 bits (94), Expect = 1e-11 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||| ||||||||||| ||||| || ||||||||||| ||| || |||||| Sbjct 90950 CCCTCCTTATCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCG 91009 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||| ||||||| || ||||| || || | |||||| || Sbjct 91010 AGGGTGATGGTC-TTCCCGTAAGGGTCTTGACGAAGATCTGCATCTT 91055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149950474370