Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 seq62 89.7 4e-13 >seq2 Length=1429897 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || || |||||||| | || || || | || || ||||| Sbjct 257260 TGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCCTCGAGCTGC 257201 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || ||||||||||| || | ||| | | ||| |||||| ||| ||| Sbjct 257200 TTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTC 257141 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | ||| || |||||| || |||| ||||||| | || ||||| Sbjct 257140 GCCTTCACGTTATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTCTTCCCCGTG 257081 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||| Sbjct 257080 AGGGTCTTGACGAAAATCTGCAT 257058 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||| ||| || || |||| || ||||| ||||| || || Sbjct 256688 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 256629 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | || | || ||| |||||| ||| || ||||| ||| Sbjct 256628 GATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGT 256570 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||||| ||||| || || | ||||| | || || ||||| || || | Sbjct 256569 TGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAGTCTTGA 256510 Query 39272 CAAAGATTTGCAT 39284 ||||||| ||||| Sbjct 256509 CAAAGATCTGCAT 256497 >seq62 Length=3011317 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| |||||||||||||| || || || ||||| | || || || |||| || ||||| Sbjct 734764 ATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTG 734823 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 |||||||| || || || ||||| ||||| | || | | ||| || ||| || || Sbjct 734824 CTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTT 734883 Query 39201 CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | || | ||| | | | ||| || || || || |||| |||||| | || |||| Sbjct 734884 CGCCTTCA-CGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCG 734942 Query 39260 TCAGCGTTTTAACAAAGATTTGCATC 39285 | ||||| || || || || |||||| Sbjct 734943 TGAGCGTCTTCACGAATATCTGCATC 734968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544877557994