Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq62 138 3e-27 seq2 123 6e-23 >seq62 Length=3011317 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 ||||| |||| |||||||| | | || | ||| || || |||||||| || |||||| Sbjct 734777 TCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAG 734836 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || || || |||||||| ||||||||||| ||||| || || ||||| |||||| Sbjct 734837 ATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACGTTG 734896 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 ||||| ||||| || | ||| || || |||||||||||||||||||| | || || | | Sbjct 734897 TCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTCACG 734956 Query 225703 AACACTTGCAT 225713 || | ||||| Sbjct 734957 AATATCTGCAT 734967 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 ||||| || || || || || || | ||||| || | ||| || | ||||| || || Sbjct 735326 AGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGT 735385 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| || ||||||||||| ||||| ||||| |||||||| || ||||||||||| ||| Sbjct 735386 TGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATC 735445 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||| || |||||||| || || | || || || | ||||| ||||||||| Sbjct 735446 TTCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCC 735505 Query 225688 GTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || || | ||| | |||||| Sbjct 735506 GTCAACGTCTTGACGAAGATCTGCATT 735532 >seq2 Length=1429897 Score = 123 bits (136), Expect = 6e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||||||||| || || || || || | ||||| |||| | ||| | || || || | Sbjct 256704 CAAGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGA 256645 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| ||||||||||| || || || ||||| ||||| || || |||||||| |||| Sbjct 256644 GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGA 256585 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| || || || ||||| || |||| || || || | ||||||||||||| Sbjct 256584 TCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGC 256525 Query 225686 CCGTCAAAGTTTT 225698 | |||| ||| || Sbjct 256524 CAGTCAGAGTCTT 256512 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||| || || |||| || ||||| | | || | ||||| Sbjct 257269 AGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCC 257210 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || || || || || ||||| |||||||| Sbjct 257209 TCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCC 257150 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| || | || || || | |||||| ||| Sbjct 257149 TGGATCTTCGCCTTCACGTTATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTC 257090 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| | || || | ||| | |||||| Sbjct 257089 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATT 257057 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || || || || || || || || | ||||| |||| || || | ||||| || || Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGT 256924 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| || || ||||| | || || ||||| || |||||||| ||||| || || ||| Sbjct 256923 TGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATC 256864 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 ||| ||| || ||||||||||| || | ||||| || | |||||||||||||| Sbjct 256863 TTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCG 256804 Query 225688 GTCAAAGTTTT 225698 |||| ||| || Sbjct 256803 GTCAGAGTCTT 256793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529091455772