Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq51 98.7 1e-15 >seq51 Length=3165537 Score = 98.7 bits (108), Expect = 1e-15 Identities = 247/369 (67%), Gaps = 5/369 (1%) Strand=Plus/Minus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| ||||||||||| || |||||||| || ||||| |||| ||| || || | ||| Sbjct 1581879 TCGTTCGAAAATGTGAGGCCGGGCATTAGCCCGCGCTTCTTGATCCAGAAGATGGAGGCG 1581820 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTA- 46790 || || ||||| ||||| || || || || || ||||| || || || | ||| || | Sbjct 1581819 AATGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAGGCAACGAGCCGCTCAGCGAAC 1581760 Query 46791 ACTG-GC-ATCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 |||| || || | | ||||| | | ||||| || ||||| ||||| | || || Sbjct 1581759 ACTGAGCGCTCGTCAGATATCCAGCGGAGTGCCCAGTCTGCCTTCTTCTTGATGCATGGG 1581700 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 || || || || || | ||||| ||| | || | ||| || | || || || Sbjct 1581699 ATGGTCTCGATGGCGTCGAAGAGGAAGGTACGCTCGGCGGGATCCTTGATGTAGGTGTCA 1581640 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | || ||| | || || || | |||||| || |||||||| ||||| || Sbjct 1581639 ATGAGGAGGGAATAGGTCTCAGAGTGCACGTTTTCGATCATTATCTGAAAGCCGTAGAAG 1581580 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCAC 47027 || | || || | ||| || || | | || || || ||||| ||||| ||||| Sbjct 1581579 CAGCGGGCCTCCGCGGCCTGGACTTCATTCGAGAACCGCTC-GACAAGGTTCTCGTTCAC 1581521 Query 47028 TATTCCATC 47036 || || || Sbjct 1581520 GATACCGTC 1581512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933170188160