Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 187 5e-42 seq62 183 6e-41 seq51 96.9 7e-15 seq35 93.3 9e-14 >seq2 Length=1429897 Score = 187 bits (206), Expect = 5e-42 Identities = 156/191 (82%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | ||||||||||||||||| ||||| || || |||||| Sbjct 256968 TCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCCGCAAAG 256909 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| || || ||||| |||||||||||||| || || |||||||| || ||| | Sbjct 256908 ATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTTTGCCTTGACGTTG 256849 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| |||||||||| || || ||||||||||||||||| || |||| |||||| || Sbjct 256848 TCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACA 256789 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 256788 AAGATCTGCAT 256778 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||||| || || |||||||| || || | Sbjct 257285 ACCACCACGCAGGCGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGA 257226 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || ||||| | ||| || || || || Sbjct 257225 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGG 257166 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| || || ||| ||||||| ||||| || | ||||| Sbjct 257165 GATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTATCGATCGTGTCAGACGACTCGAC 257106 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||| ||||| ||||| | ||||| ||||| ||||||||| Sbjct 257105 CTCCAGCGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATT 257057 Score = 156 bits (172), Expect = 9e-33 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | ||| ||||| || ||||| || || || || || ||| Sbjct 256687 TCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAG 256628 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | || || |||||| ||| || ||||||||||| |||||||| ||||| ||| | Sbjct 256627 ATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG 256568 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || || ||||| | ||||| ||||| ||||||||||| || |||| |||||| || Sbjct 256567 TCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAGTCTTGACA 256508 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 256507 AAGATCTGCAT 256497 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||||| || || | || || || ||||| | ||||| ||| Sbjct 256248 CCCTCCTTGTCCTGGATCTTTGTCTTGACATTGTCAATGGTATCCGAGGACTCGACCTCG 256189 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 256188 AGGGTGATGGTCTTGCCGGTAAGGGTCTTTACGAAGATCTGCAT 256145 >seq62 Length=3011317 Score = 183 bits (202), Expect = 6e-41 Identities = 164/206 (80%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282894 AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGT 282953 ||||| | |||||| ||||| ||||||||||| || | |||||||| || ||||| || Sbjct 734762 AGATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGC 734821 Query 282954 TGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATC 283013 || || || || ||||| | || |||||||| ||||||||||||||| || || ||| Sbjct 734822 TGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATC 734881 Query 283014 TTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCC 283073 || || || ||| | ||||| |||||||||| |||||| || | ||||||||||| ||| Sbjct 734882 TTCGCCTTCACGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCC 734941 Query 283074 GTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| |||||||||||||| Sbjct 734942 GTGAGCGTCTTCACGAATATCTGCAT 734967 Score = 183 bits (202), Expect = 6e-41 Identities = 158/193 (82%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || || || ||||||||||| | |||| ||||| |||||||| ||||| || ||||| || Sbjct 735341 TCCTTCTGAATGTTGTAGTCCGACAAG-GTGCGACCATCCTCCAGTTGCTTACCGGCGAA 735399 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | |||||| |||||| |||||| |||||||||||||| ||||| || || ||| | Sbjct 735400 GATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 735459 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| || ||||| | ||||| ||||| ||||| ||||| |||||||| ||||| || Sbjct 735460 GTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTCAACGTCTTGAC 735519 Query 283088 GAATATCTGCATT 283100 ||| ||||||||| Sbjct 735520 GAAGATCTGCATT 735532 Score = 102 bits (112), Expect = 2e-16 Identities = 89/108 (82%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTC 283054 ||||||||||| |||||||| || || || | ||||| |||| || |||| ||||| || Sbjct 735709 CCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGT-CGGAGCTCTCGACCTC 735767 Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||||||| ||||| || |||||||| || ||||| |||||||| || Sbjct 735768 GAGAGTGATGGTCTTTCCGGTCAAAGTTTTCACGAAAATCTGCATGTT 735815 >seq51 Length=3165537 Score = 96.9 bits (106), Expect = 7e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 230212 TTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAG 230271 |||| ||| || ||||||||||| | | |||||| | || || ||||| ||||| | Sbjct 1579379 TTCCATGCGCGCTCATCGGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCG 1579320 Query 230272 CTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCG 230331 | || ||| | |||| || || || ||||||| || | || ||||||||||| Sbjct 1579319 CCGACCGTCTACTCGTTGCCCTCGGTGACGAGAAGTACTACGGCGTCACGAACCCCTTCG 1579260 Query 230332 CTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCG 230391 || ||||| | || || |||||||| || || ||||||||||| ||||| || | Sbjct 1579259 ACTTCATGGACATGATCTCGCTCCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTATCGG 1579200 Query 230392 ATTA-TCAAAGGCCCGGTGT 230410 | || || |||| ||||||| Sbjct 1579199 AGTACTCCAAGG-CCGGTGT 1579181 >seq35 Length=1232546 Score = 93.3 bits (102), Expect = 9e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| || |||||||| || || | ||||| |||||||| | || || || Sbjct 1141254 CCCTCCTTGTCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCA 1141195 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101 || ||||| ||||| ||||| | ||||| ||||| |||||||||| Sbjct 1141194 AGGGTGATGGTCTTGCCCGTGAGGGTCTTTACGAAGATCTGCATTT 1141149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737349234252