Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq62 165 6e-36 seq2 147 2e-30 >seq62 Length=3011317 Score = 165 bits (182), Expect = 6e-36 Identities = 164/211 (78%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| || |||||||||||||| || |||||||||||||| | ||| |||| |||| | Sbjct 734757 CACCGAGATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCT 734816 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 |||||||||| || || ||||| | ||||| || |||| || | ||| ||||| ||| Sbjct 734817 CCAGCTGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCT 734876 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||||| | | || ||||| | ||||| ||||||| ||| ||||||| Sbjct 734877 GAATCTTCGCCTTCACGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCT 734936 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||| ||||||||||| || ||||| Sbjct 734937 TGCCCGTGAGCGTCTTCACGAATATCTGCAT 734967 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | ||||||||||||||||||| ||||||||||||||| || || Sbjct 734965 CATCCCTCCGCGCAGACGCAACACCAGGTGAAGCGTGGACTCCTTTTGGATGTTATAGTC 735024 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || || |||||||||||||| || ||||||||||| ||||| | Sbjct 735025 CGAAAGGGTACGTCCATCTTCGAGCTGCTTCCCGGCGAAAATCAAACGCTGTTGATCGGG 735084 Query 44227 AGG 44229 ||| Sbjct 735085 AGG 735087 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT-CGGCGAGTTGGCGCTCGTCG 44185 |||| ||||||||||| |||||| || |||||||| | || | || | ||| | || Sbjct 735321 CACCGAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGT-GCGACCATCC 735379 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 ||||| ||||| ||||| ||||| | ||| ||||| || | || | || ||||| || Sbjct 735380 TCCAGTTGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCT 735439 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| | | | ||||| || | || || ||||| | || || ||| Sbjct 735440 TGAATCTTCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTC 735499 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | ||||| |||||||| ||||| Sbjct 735500 TTGCCCGTCAACGTCTTGACGAAGATCTGCAT 735531 >seq2 Length=1429897 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| |||||||| ||||| | ||| ||| | || || Sbjct 257266 ACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCCTCG 257207 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | |||||||||||| | || | ||| ||||| ||| Sbjct 257206 AGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGG 257147 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||| | || || ||||||| ||| || ||||| Sbjct 257146 ATCTTCGCCTTCACGTTATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTCTTC 257087 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| ||||| || ||||| Sbjct 257086 CCCGTGAGGGTCTTGACGAAAATCTGCAT 257058 Score = 120 bits (132), Expect = 2e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || ||||| || |||||| || |||||||| |||| || ||| | || ||||| Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGT 256924 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || ||||||||||| |||||||| || | || | ||| ||||| ||| ||| Sbjct 256923 TGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATC 256864 Query 44252 TTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 || ||| | | ||| | |||||||| | || |||||||| | || |||||||| || Sbjct 256863 TT-TGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCC 256805 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| || ||||| |||||| Sbjct 256804 GGTCAGAGTCTTGACAAAGATCTGCATG 256777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989794541146