Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq62 159 3e-34 seq2 152 5e-32 seq13 100 3e-16 seq35 95.1 1e-14 >seq62 Length=3011317 Score = 159 bits (176), Expect = 3e-34 Identities = 165/212 (78%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||| |||| | Sbjct 734757 CACCGAGATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCT 734816 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | ||||||||||| ||||| || |||||||||||||| | |||| | |||||| ||| Sbjct 734817 CCAGCTGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCC- 734875 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| | || || | ||| | | | ||||| || || ||||||| ||| ||||| Sbjct 734876 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTC 734935 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| |||||||| ||||| |||||||| Sbjct 734936 TTGCCCGTGAGCGTCTTCACGAATATCTGCAT 734967 Score = 120 bits (132), Expect = 3e-22 Identities = 156/212 (74%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| || || ||||| ||||||||||||||| ||||| || | |||||| | || | Sbjct 735321 CACCGAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCT 735380 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | || ||||| |||||||| || || || || ||||| | |||| || |||||||| | Sbjct 735381 CCAGTTGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGT-CT 735439 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| | || || | ||| | | | || || |||||| ||||| | || || || Sbjct 735440 TGAATCTTCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTC 735499 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||||| |||||| ||||| |||||||| Sbjct 735500 TTGCCCGTCAACGTCTTGACGAAGATCTGCAT 735531 Score = 109 bits (120), Expect = 5e-19 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| |||||||| || |||||| |||||| || ||||||||||| || Sbjct 734969 CCTCCGCGCAGACGCAACACCAGGTGAAGCGTGGACTCCTTTTGGATGTTATAGTCCGAA 735028 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||| || | || ||||||||||| |||||||| |||| |||||||| || Sbjct 735029 AGGGTACGTCCATCTTCGAGCTGCTTCCCGGCGAAAATCAAACGCTGTTGATC 735081 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | || || || || || ||||||||||||||| ||||||||| Sbjct 735533 CCGCCACGCAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 735592 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| |||||||||||||| ||||| |||| |||||| || |||| ||| Sbjct 735593 AGGGTACGACCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGATCCGGGGGG 735652 Query 41756 ACGCT 41760 | ||| Sbjct 735653 ATGCT 735657 >seq2 Length=1429897 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || |||||||||||||| |||||||| || ||| Sbjct 257284 CCACCACGCAGGCGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAG 257225 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| ||||| || || ||||| || |||| ||| Sbjct 257224 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGG 257165 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| ||| | | ||||| |||||| || Sbjct 257164 ATACCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTATCGATCGTGTCAGACGACTCGAC 257106 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| || || || ||||| || ||||| |||||||||||||| Sbjct 257105 CTCCAGCGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 257058 Score = 138 bits (152), Expect = 1e-27 Identities = 164/219 (75%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 41646 GACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCT 41705 |||||| || || || || || ||||||||||||||| |||||||| || ||||| Sbjct 256711 GACGTACCA--AGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGAC 256654 Query 41706 CGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCT 41765 |||| |||||||||||||| ||||| || |||||||| ||||| | || | || ||||| Sbjct 256653 CGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCT 256594 Query 41766 TGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 ||||| || | || |||| ||| | | | || || ||||| ||||| | || Sbjct 256593 TGTCC-TGGATCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTG 256535 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || ||||| ||||| || || ||||||||| Sbjct 256534 ATCGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCATG 256496 Score = 129 bits (142), Expect = 5e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| || || ||||||||||||||| |||||||| || ||||| | || || || Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGT 256924 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| || || || |||| ||||| ||||||| ||||| | |||||| ||| ||| | Sbjct 256923 TGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCC-TGAAT 256865 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 ||||| | ||| | | | ||||| ||||||||||| | || ||||| || || Sbjct 256864 CTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCC 256805 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||||| || || ||||||||| Sbjct 256804 GGTCAGAGTCTTGACAAAGATCTGCATG 256777 Score = 86.0 bits (94), Expect = 6e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || || ||| ||||||||| ||||| ||||| || || || || |||| |||||| Sbjct 256412 AGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCGAGC 256353 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 |||||||||||||| || |||||||| || || Sbjct 256352 TGCTTGCCGGCGAAGATGAGGCGCTGCTGATC 256321 >seq13 Length=1377620 Score = 100 bits (110), Expect = 3e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| || || ||| ||||||||| ||||| |||||| ||| || || |||| || Sbjct 90782 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTC 90841 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCT 41760 ||||||||||||||||| ||||||||||| ||||| | ||| | ||| Sbjct 90842 AAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCT 90889 >seq35 Length=1232546 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || || ||||||||| ||||| |||||| | Sbjct 1141433 CCACCACGGAGGCGGAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1141374 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||| ||||| ||||||||||| || || | ||| Sbjct 1141373 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCGGGGGGG 1141314 Query 41756 ACGCT 41760 | ||| Sbjct 1141313 ATGCT 1141309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303202525600