Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq11 113 4e-20 seq2 113 4e-20 >seq11 Length=377427 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| || | ||| | ||| |||||||| || ||||| ||||||| | Sbjct 144711 CCACCTCGGAGACGGAGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAC 144652 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| || |||| || ||||| || || ||| | || || | |||||| || ||| Sbjct 144651 AAGGTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGGGA 144592 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| || || | | | | ||| || || ||| Sbjct 144591 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGACC 144532 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || |||||||| || ||||| Sbjct 144531 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 144485 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | ||||||||| || |||||||| ||||||| | Sbjct 144939 CCTCCACGGAGACGGAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGAC 144880 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | ||||||| || || || || || |||| |||| |||||||| ||| Sbjct 144879 AAGGTGCGACCGTCCTCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGGG 144820 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| |||||| || || | | ||| || || || || | Sbjct 144819 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACT 144760 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || || || ||||| || || ||||| Sbjct 144759 TCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 Score = 109 bits (120), Expect = 5e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | || |||||||| || ||||| ||||||| Sbjct 224474 CCACCACGCAGGCGAAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 224533 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | |||||| || ||| Sbjct 224534 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGGA 224593 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || |||| Sbjct 224594 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACC 224653 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATC 21183 || | ||| ||||| ||||| || | || |||||||| || ||||| ||| ||| Sbjct 224654 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACAAAGATCTGCATCTTGTATC 224708 >seq2 Length=781092 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| |||||||||||||| ||||| | ||||| || |||| || ||||| ||||| Sbjct 629676 GTGGATTCCTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCG 629617 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| || ||| | |||||||||||| |||||| ||| Sbjct 629616 GCGAAGATTAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTG 629557 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || || | ||| || | |||||||||||||||||| || || Sbjct 629556 ACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTAATGGTCTTGCCGGTCAAGGTC 629497 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 629496 TTGACAAAGATCTGCAT 629480 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || ||||| | ||| || | |||| |||| |||||| || ||||| ||||| Sbjct 630166 GTTACCGCCACGCAGACGGAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTC 630107 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | ||| || | | ||||| ||||| || || ||| | || |||| ||||||||| Sbjct 630106 GGACAGTGTACGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGG 630047 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | || |||||||| |||||| || || | | ||| || || | ||| Sbjct 630046 TGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAAGACTC 629987 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || ||||||||||| | || ||||| || || ||||| Sbjct 629986 GACTTCCAACGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | || |||||||| || ||||| ||||||| Sbjct 629478 CCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 629419 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||||| ||||| || || || |||| || | ||||||||| || Sbjct 629418 AGCGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGG 629359 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | || || | |||| Sbjct 629358 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 629299 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | || ||||| || || ||||| Sbjct 629298 TCGAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 629252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422208802440788