Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 152 4e-32 seq11 122 8e-23 seq1 82.4 7e-11 >seq2 Length=781092 Score = 152 bits (168), Expect = 4e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| |||| |||||| | ||| | || ||| ||||||||||||||||||| Sbjct 629936 TACCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGC 629877 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| ||||| |||||||||||| || ||||| ||||||| |||||||| ||||||| Sbjct 629876 TCAGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAG 629817 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || |||||||| ||||| || || | || | ||||||| ||||| Sbjct 629816 GGATACCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGA 629757 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || || || || || || || ||||||||||| Sbjct 629756 CTTCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| || | || || |||||| Sbjct 629460 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGTCCGTCCTCG 629401 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| ||| | |||||||||||||| || ||||| |||||||||||||| Sbjct 629400 AGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 629341 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||| ||||||| ||| | || ||| Sbjct 629340 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTG 629281 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 ||||||||||| || || || ||||||||||| Sbjct 629280 CCGGTCAGAGTCTTGACGAAGATCTGCATGGC 629249 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | ||||| ||| || || |||||||||||||| ||| Sbjct 629708 TACCACCACGGAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGG 629649 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| || |||||||| || || ||| |||| || ||||||||||| || | Sbjct 629648 AAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGG 629589 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| |||||||| || || ||| || | || | |||||||| ||| | Sbjct 629588 GAATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAA 629529 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || |||||||||| || || ||||| |||||||| Sbjct 629528 CCTCGAGGGTAATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||| || || || |||||||||||| || ||||| | Sbjct 630127 CTCCTTCTGGATGTTGTAGTCGGACAGTGTACGACCATCCTCGAGCTGCTTACCAGCAAA 630068 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 |||||| |||||||| ||||| || || ||||||||||| || || || || | Sbjct 630067 GATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 630008 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | |||||| || | || | ||| |||||||| || || || || Sbjct 630007 GTCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGTCTTGCCGGTGAGTGTCTTGAC 629948 Query 118727 AAAAATCTGCAT 118738 ||||||||||| Sbjct 629947 GAAAATCTGCAT 629936 >seq11 Length=377427 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || || ||||| || || ||||| ||||| Sbjct 144681 GTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTGCGGCCGTCTTCAAGCTGCTTTCCG 144622 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || ||||||||||||||||||| || || ||||| |||||||| ||| || || Sbjct 144621 GCAAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTG 144562 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | | ||||||||||| ||| | || |||||||| ||||| Sbjct 144561 ACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTC 144502 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 144501 TTGACAAAGATCTGCAT 144485 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||||| ||||| Sbjct 224491 CACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 224550 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| ||||||||||| || || ||||| |||||||| Sbjct 224551 GAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTG 224610 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| | ||| ||||||| ||| | ||||| Sbjct 224611 GATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGATGGTTTT 224670 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || ||||| |||||||| Sbjct 224671 GCCCGTGAGGGTCTTGACAAAGATCTGCAT 224700 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | | | ||||| |||| || |||||||| ||||||||||| || Sbjct 144940 ACCTCCACGGAGACGGAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGA 144881 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||||| |||||||| || ||||| ||| | ||||| || ||||| || || || Sbjct 144880 CAAGGTGCGACCGTCCTCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGG 144821 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 |||||||| ||||| || || || || | |||| |||||| | | || || Sbjct 144820 GATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAAC 144761 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||| | || ||||| |||| || || || || |||||||| Sbjct 144760 TTCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 >seq1 Length=1046041 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 845810 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTG 845751 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || |||||||| ||||| || || ||||||||||| ||| || Sbjct 845750 CTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTT 845691 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGT 118699 || || | |||| |||||| | ||| ||||| | ||| Sbjct 845690 GGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 845646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433778621392756