Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20]
9,793 sequences; 21,322,328 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq2 138 1e-27
seq11 122 1e-22
seq1 84.2 3e-11
>seq2
Length=781092
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| | || |||||||| | || | ||||||||||||||||| |||||||| |
Sbjct 629934 CCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTC 629875
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||||||||| || ||||||||||||||||||| ||
Sbjct 629874 AGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGG 629815
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135
| | ||||||||| |||||| |||| ||| | | | |||||| || || ||
Sbjct 629814 ATACCTTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGAC 629756
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||| || || || |||||||| || || || |||||
Sbjct 629755 TTCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040
|||| ||||||||||| || || ||||| || | ||| || || | || || ||||||
Sbjct 630138 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGTGTACGACCATCCTCGAGCTGC 630079
Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100
|||||||| || ||||||||||||||||||| || | | |||||||||| ||| ||
Sbjct 630078 TTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTG 630019
Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160
|||| | | | |||||| || || || || | |||||| || ||||| ||
Sbjct 630018 GCCTTGACATTGTCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGTCTTGCCGGTG 629959
Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || || || |||||
Sbjct 629958 AGTGTCTTGACGAAAATCTGCAT 629936
Score = 111 bits (122), Expect = 2e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || |||| || |||||||| || |||||
Sbjct 629443 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 629384
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | || |||||||||| ||| || |||| |||
Sbjct 629383 AATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 629325
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || ||||| |||| ||||| || ||||| || || ||||| |
Sbjct 629324 TGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGAGTCTTGA 629265
Query 43171 CAAAGATTTGCAT 43183
| ||||| |||||
Sbjct 629264 CGAAGATCTGCAT 629252
Score = 109 bits (120), Expect = 6e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
|||||| || | || | |||| ||||||||||| ||||| || | || || || |
Sbjct 629695 ACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCC 629636
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||| || ||||| || || |||||||| || | || | || |||||
Sbjct 629635 GTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGAATGCCTTCCTT 629576
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
|||| ||| || ||||| ||| | | | ||||| ||| || || |||| || |
Sbjct 629575 GTCCTGGATCTTGGCTTTGA-CGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTAA 629517
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| ||||| || | ||||| |||||||| |||||
Sbjct 629516 TGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480
>seq11
Length=377427
Score = 122 bits (134), Expect = 1e-22
Identities = 146/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || |||| || ||||||||||| |||||
Sbjct 224509 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 224568
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| |||||||| || | || | || ||||||||| ||| || |||| |||
Sbjct 224569 GATGAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 224627
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | ||||| || ||||| |||| ||||||||||||||||| || ||||| |
Sbjct 224628 TGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGA 224687
Query 43171 CAAAGATTTGCATTTT 43186
||||||| ||||| ||
Sbjct 224688 CAAAGATCTGCATCTT 224703
>seq1
Length=1046041
Score = 84.2 bits (92), Expect = 3e-11
Identities = 122/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || |||| || ||||||||||| |||||
Sbjct 845798 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 845739
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || ||||||||||||| || | | |||||||||| ||| | || | ||||
Sbjct 845738 GATCAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC-TGAATCTTGGCCTTGACAT 845680
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160
| | | |||||| || ||||| || | |||||||| || || |||
Sbjct 845679 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTACCTGTT 845630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571747602378040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |