Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq33 159 7e-34 >seq33 Length=192376 Score = 159 bits (176), Expect = 7e-34 Identities = 779/1209 (64%), Gaps = 49/1209 (4%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | ||||| | ||||| || || ||| || || |||||| || | |||||| Sbjct 134598 TACAACTTCTTCGGCTTCAAGACCCTCGAGCGTTCCTACCTCCTCCGCATCAACGGCAAG 134539 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| || || ||||||||| | ||||| || || ||||| || ||| | ||| Sbjct 134538 GTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGAATCCACGGCCAGGAC 134479 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||||||| |||||||||||| | ||| || | | || || ||| | Sbjct 134478 ATCGAGAGCGCCATCGAGACGTACAACCTCATGTCGCAAAAGTACTTCACCCACGCCTCG 134419 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || ||||||||||| |||||| || ||||| |||||||| ||| | || Sbjct 134418 CCCACCCTCTTCAACGCTGGTACCCCACACCCGCAGCTCTCGTCGTGCTTCCTTGTCACC 134359 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATT 249114 ||| | |||||||| |||||||||| || |||||||| | ||||| || | ||| Sbjct 134358 ATGAAGGACGACTCGATCGACGGCATCTACGACACGCTCA---AGACGTGTGCCATGATC 134302 Query 249115 TCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTAC 249174 || || ||| || || ||||| ||| | || | |||||| | | || || ||| Sbjct 134301 TCCAAGACCGCCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGTACCGGATCCTAC 134242 Query 249175 ATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCC 249234 || || || || || ||||| |||||||||| ||| | || || ||| | | Sbjct 134241 ATTGCCGGCACCAACGGTGTCAGCAATGGTATCGTCCCCATGCTCCGCGTCTTCAACAAC 134182 Query 249235 ACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTAT 249288 || || | | | | |||||| || ||||| || | |||||||| || Sbjct 134181 ACTGCGCGCTACGTTGACCAGGGTGGCAACAAGCGCC---CCGGTGCCTTCGCCATCTAC 134125 Query 249289 TTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAAC 249348 | || |||||| | || | || |||||||| ||| | |||||| |||| || Sbjct 134124 ATCGAGCCATGGCACTCGGACGTGTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAG 134065 Query 249349 GAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGC 249408 || || | || ||||| |||||||||| || ||||| |||| | |||||| Sbjct 134064 GAAGAGGTGCGTGCTCGTGAGCTCTTCTACGCGCTCTGGGTGCCCGATCTCTTCATGAAG 134005 Query 249409 CGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCAT 249467 | ||| || ||||||| ||| |||| | | || ||| ||||||| ||| Sbjct 134004 AGGGTCGAGCAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGG-TCTCGC 133946 Query 249468 CGATCTAC-ACGGCGCCGACTTCGACCAAGCCTATA--AGAAATACGAATCCAACGGCAT 249524 ||| || | |||||| ||| ||||| | |||| || || ||||| || | || Sbjct 133945 CGA-CTGCTACGGCGACGAGTTCGAGC--GCCTCTACGAGCGCTACGAGGCCGAGGGTCG 133889 Query 249525 CGGCAAG---ACAATCAAGGCTCGGACCCT-TTTTGCGAAGGTGGTGGAGTCCCAGATAG 249580 | |||| || ||||||| | || || | | || | | ||||| |||| || Sbjct 133888 CTCCAAGCGCACCGTCAAGGCGCAGAAGCTCTGGTACG-CCATCCTCGAGTCGCAGACAG 133830 Query 249581 AGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGG 249639 |||| || || | | || | | ||| ||||| |||| ||||| ||||| | Sbjct 133829 AGACCGGCAACCCCT-TCATCCTCTACAAGGACGCTGCCAACCGAAAGAGCAACCAGAAG 133771 Query 249640 CATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATAC-TCG-TCCA 249697 | || || || ||| | || || || || | ||| | || | ||| || ||| Sbjct 133770 AACCTCGGCACTATCAAGTGCTCCAACCTGTGCACCGAGATCATCGAGTACAGCGCTCC- 133712 Query 249698 AGGAGGAGATTGCCGTCTGCAACCTGGCAAGCATCAATCTCGTGAGGCACGT-GAGGGCG 249756 || ||| | |||||||||||||| || ||| || | | | || || Sbjct 133711 -CGACGAGGTCGCCGTCTGCAACCTTGCCTCCATTGCCCTTCCCACCTTCATCGACCCCG 133653 Query 249757 -GAC--AGGACGTTCGACTTCGAGCGTCTTCACCGGACGGCGAAACAGGCGAT---CAAA 249810 || ||| | | ||||||| |||| || ||| | || | |||| || ||| Sbjct 133652 TCACCAAGGTC-TACGACTTCAAGCGCCTCCACAGTGTCGCCA---AGGCCATCTGCAAG 133597 Query 249811 AACCTCAACAAGGTGATTGATGTCAATTTTTACCCCCTTGAGGAATGCAGGTTGTCCAAC 249870 |||||||||||| | || || |||| | |||||| | ||||| | | ||||||| Sbjct 133596 AACCTCAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGCAGGTCCAAC 133537 Query 249871 ATGAAGCACCGTCCATGTGGGC-TGGGCGTTCAGGCACTGCACGACGTCTACATGGTGAT 249929 ||| || || || | | ||| | || || |||| || ||||| || |||| | || Sbjct 133536 ATGCGCCATCG-CCCTATCGGCATCGGTGTCCAGGGTCTCGCCGACGCCTTCATGATCAT 133478 Query 249930 GGGATTCCCCTTCGAGTCAGAGGAGGCAGCGACG-CTAAATAAACAGATTTTCGAGACCA 249988 ||| | | ||||||| || ||||| || || || || ||||| |||||||||| Sbjct 133477 GGGCTACGCCTTCGAATCGCCCGAGGC-TCGCCGTCTCAACGTGCAGATCTTCGAGACCA 133419 Query 249989 TCTATCACG 249997 |||| |||| Sbjct 133418 TCTACCACG 133410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073631671509824