Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq62 122 2e-22 seq33 93.3 8e-14 >seq62 Length=98030 Score = 122 bits (134), Expect = 2e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 ||||||||||| || || || |||||||| |||| | ||||| ||||| |||||| || Sbjct 37286 GCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCTGGCTC 37227 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||||| | ||| | |||| |||||||||| |||||| ||| |||| || | ||||| Sbjct 37226 AAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAG 37167 Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 |||||||| ||||||||| ||| | || || Sbjct 37166 GGTCTTCACACCGACTTTGCCTGCCTCCTCTT 37135 >seq33 Length=192376 Score = 93.3 bits (102), Expect = 8e-14 Identities = 415/646 (64%), Gaps = 10/646 (2%) Strand=Plus/Plus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 || || ||||| || |||||| | || ||||| ||||| | | ||||| || Sbjct 133892 CCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCGAACTCGTCGCCGTAGCAGTCGGCGAGA 133951 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATT-CTTCCCAGCCTTCACTCTCTCCAT 94517 || |||||||||| ||||||||| || ||||| | | | || | || |||| ||| Sbjct 133952 CCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGC-TCGACCCTCTTCAT 134010 Query 94518 GAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTACC 94577 ||||||||| | ||||||| || ||| || || | | | || ||||| || || Sbjct 134011 GAAGAGATCGGGCACCCAGAGCGCGTAGAAGAGCTCACGAGCACGCACCTCTTCCTTTCC 134070 Query 94578 GGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAATATAGAT 94637 | ||||| | | ||||| || || ||||||| ||||| || ||||| Sbjct 134071 GTGGTTCTTGCGGAGGTCAAGGAACTCGAACACGTCCGAGTGCCATGGCTCGATGTAGAT 134130 Query 94638 GGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGTTAAA 94697 ||| || || | ||||| || |||||| ||| | | ||| | ||| || Sbjct 134131 GGCGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGAA 134190 Query 94698 GATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTCCATGACGA-AATGGGGCTTC 94756 || |||| | | | || |||| | | ||| | || || |||| | || Sbjct 134191 GACGCGGAGCATGGGGACGATACCATTGCTGACACCGTTGG-TGCCGGCAATGTAGGATC 134249 Query 94757 CTTTTGCCCTCAAAT-CA-TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGAT 94814 | | || | || || || | || || ||||| || || || ||||||||||| || Sbjct 134250 CGGTA--CCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCAT 134307 Query 94815 TGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAG 94874 || | ||| || || || || || || || || || || | | | | ||| Sbjct 134308 GGCACACGTCTTGAGCGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACAAG 134367 Query 94875 GAAGCACGAGGAAAGTTG-GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCAT 94933 ||||||||| || || || ||||||| || ||| || || || ||||| || || | Sbjct 134368 GAAGCACGACGAGAGCTGCGGGTGTG-GGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGT 134426 Query 94934 GGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATC 94993 |||| || || | ||||||||| | || || || ||| | | |||||| | Sbjct 134427 GGGTGAAGTACTTTTGCGACATGAGGTTGTACGTCTCGATGGCGCTCTCGATGTCCTGGC 134486 Query 94994 CGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTC 95039 |||| || ||||| || |||||||| | ||||| ||| || ||||| Sbjct 134487 CGTGGATTCCGACGGCGACACGCATGAGCATGTGCTGGGGACGCTC 134532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989459834112315