Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq62 125 9e-24 seq33 89.7 6e-13 >seq62 Length=98030 Score = 125 bits (138), Expect = 9e-24 Identities = 175/245 (71%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| ||||||||||| | || | ||||| || || ||||| Sbjct 37144 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGA 37203 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 37204 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAG 37263 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 33758 || || || || ||||||||||| || || | |||| || | ||||| |||| Sbjct 37264 ATGCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCTG 37323 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| ||||||| |||||||||| || || || || || || | ||| | | Sbjct 37324 ATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 37383 Query 33819 AAGAG 33823 ||||| Sbjct 37384 AAGAG 37388 >seq33 Length=192376 Score = 89.7 bits (98), Expect = 6e-13 Identities = 607/971 (63%), Gaps = 6/971 (1%) Strand=Plus/Plus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| || || || || || ||||| ||||| | | | | || | || ||||| Sbjct 133676 GCAATGGAGGCAAGGTTGCAGACGGCGACCTCGTCGGGAGCGCTGTACTCGATGATCTCG 133735 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||| || || ||||||||||| || | || | || || |||||| ||| Sbjct 133736 GTGCACAGGTTGGAGCACTTGATAGTGCCGAGGTTCTTCTGGTTGCTCTTTCGGTTGGCA 133795 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 || ||||| || || ||||| || | || || || |||| || || | || || | | Sbjct 133796 GCGTCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCTGTCTGCGACTCGAGGATGGCGTAC 133855 Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATA 63181 |||| | || | ||||| | | ||| | | | || ||||| | || Sbjct 133856 CAGA-GCTTCTGCGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCGTA 133914 Query 63182 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACAT 63241 | || ||||||||||| || | | | | | | || || || | || ||||| Sbjct 133915 GAGGCGCTCGAACTCGTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACAT 133974 Query 63242 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63301 | |||||| || |||| | || || | ||||| |||||||| || | ||| || || Sbjct 133975 GAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGCGC 134034 Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361 || || || | | | || || ||||| ||||| || || ||||| Sbjct 134035 GTAGAAGAGCTCACGAGCACGCACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAA 134094 Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421 | | | | || || ||||| || || | ||| ||||| | | || || || ||||| Sbjct 134095 CTCGAACACGTCCGAGTGCCATGGCTCGATGTAGATGGCGAAGGCACCGGGGCGCTTGTT 134154 Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481 || ||||| || | ||| | || ||||| || | || | | ||| || | ||||| Sbjct 134155 GCCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACC 134214 Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541 || | ||| ||||| |||| || ||| ||| | | || || | | || Sbjct 134215 ATTGCTGACACCGTTGGTGCCGGCAATGTAGGATCCGGTACCGCGGATGC-AGTGGATGT 134273 Query 63542 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAG 63599 | || || || || || || | || ||||| | || || ||| || | |||||| ||| Sbjct 134274 TGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACA-CGTCTTGAGCGTGTCGTAG 134332 Query 63600 ATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659 ||||| || || || || ||||| | | || || || || | || | | Sbjct 134333 ATGCCGTCGATCGAGTCGTCCTTCATGGTGACAAGGAAGCACGACGAGAGCTGCGGGTGT 134392 Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719 | || || || || || | ||| || || ||||| || || | |||| || | || Sbjct 134393 GGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTTTGCGACATGAGG 134452 Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63779 ||||||||||| || || || || ||| || ||||| || ||||||||||| Sbjct 134453 TTGTACGTCTCGATGGCGCTCTCGATGTCCTGGCCGTGGATTCCGACGGCGACACGCATG 134512 Query 63780 AACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63839 | ||||||||| || | || | | ||| ||| || | | |||||| || Sbjct 134513 AGCATGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAACGCTCG 134572 Query 63840 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 63899 | || || || || || ||||||| ||||| || ||||| || || |||| | | Sbjct 134573 AGGGTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCG 134632 Query 63900 AGCTTATCCTT 63910 |||| ||||| Sbjct 134633 AGCTGGTCCTT 134643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629740502453040