Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq62 136 6e-27 >seq62 Length=98030 Score = 136 bits (150), Expect = 6e-27 Identities = 368/561 (66%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | || || |||||||| || ||||| Sbjct 37144 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGA 37203 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 37204 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAG 37263 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGT 50136 || || || || || |||||||| | || | |||| || | |||||| |||| Sbjct 37264 ATGCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCTG 37323 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||||| |||||||||| || || || || || || | ||| | | Sbjct 37324 ATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 37383 Query 50197 AAGAGATAGtttttttCATTACTATCTTT----AACATAAGTATCGATCAAAAGACTATA 50252 ||||| | || | | || | || | || || ||||| | || || Sbjct 37384 AAGAGGAA----TTCGCGCTGCTCTGGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTA 37439 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 ||||||| || ||||| || || ||||| || |||||||| || | ||||||| Sbjct 37440 GGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGC 37499 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 ||| ||||| | | ||||| || | | || || || || || ||||| || Sbjct 37500 GGCCTGAACTTCCGAGCTGAATCGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGC 37559 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT--- 50429 || || || || | || || || || || |||||| | || || || Sbjct 37560 GGCGAAGAAGGCGAGAACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTC 37619 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| || | || || || || | || | || || | ||||| || || ||||| || Sbjct 37620 CCAGTCGTGGAGGTCCTTGGAAAGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGC 37679 Query 50490 CTTTTTATACATATTCCAGAT 50510 ||| || ||||| | |||||| Sbjct 37680 CTTCTTGTACATTTGCCAGAT 37700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718180874920520