Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq33 96.9 5e-15 >seq33 Length=192376 Score = 96.9 bits (106), Expect = 5e-15 Identities = 463/729 (64%), Gaps = 8/729 (1%) Strand=Plus/Plus Query 71941 CGTTCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAA 71999 || ||||||||||| || | ||| | | | | || || || || || || ||||| | Sbjct 133919 CGCTCGAACTCGTCGCCGTA-GCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAG 133977 Query 72000 TGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 72059 ||||| || || | | | || | ||||| |||||||| || | ||| || || Sbjct 133978 CGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGCGCGTA 134037 Query 72060 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 72119 || || || | | | ||| || ||||| ||||| || || |||||| | Sbjct 134038 GAAGAGCTCACGAGCACGCACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTC 134097 Query 72120 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCC 72179 | | || || ||||| || || | ||| ||||| | | || || || ||||| || Sbjct 134098 GAACACGTCCGAGTGCCATGGCTCGATGTAGATGGCGAAGGCACCGGGGCGCTTGTTGCC 134157 Query 72180 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 72239 ||||| || | ||| | || ||||| || | || | | ||| || | |||||||| Sbjct 134158 ACCCTGGTCAACGTAGCGCGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCATT 134217 Query 72240 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGAT 72297 | |||| ||||| |||| || ||| ||| | | || || | || |||| Sbjct 134218 GCTGACACCGTTGGTGCCGGCAATGTAGGATCCGGTACCGCGGATGCAGTGGATGTTGA- 134276 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGAT 72356 | || || || || || | || ||||| | || || ||| || | ||| || ||||| Sbjct 134277 -GGCCGATACCACCGGCGGTCTTGGAGATCATGGCACA-CGTCTTGAGCGTGTCGTAGAT 134334 Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 72416 ||| || || || ||| ||||| | | || || || || | || | | Sbjct 134335 GCCGTCGATCGAGTCGTCCTTCATGGTGACAAGGAAGCACGACGAGAGCTGCGGGTGTGG 134394 Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 || || || || || | ||| || || ||||| || || | |||| |||| || || Sbjct 134395 GGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTTTGCGACATGAGGTT 134454 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 ||||||||| || || || || ||| || ||||| || ||||||||||| | Sbjct 134455 GTACGTCTCGATGGCGCTCTCGATGTCCTGGCCGTGGATTCCGACGGCGACACGCATGAG 134514 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 ||| ||||| || | || ||| |||| || || | | |||||| || | Sbjct 134515 CATGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAACGCTCGAG 134574 Query 72597 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 || || || || || ||||||| ||||| || ||||| || || |||| | ||| Sbjct 134575 GGTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAG 134634 Query 72657 TTTATCCTT 72665 | ||||| Sbjct 134635 CTGGTCCTT 134643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671057044172680