Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq62 233 3e-56 seq33 172 8e-38 >seq62 Length=98030 Score = 233 bits (258), Expect = 3e-56 Identities = 584/867 (67%), Gaps = 39/867 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| ||||| ||||| | || ||| |||| || Sbjct 37700 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTT 37641 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 ||||||||||| |||| ||||| || | | || || | ||||| | || || || Sbjct 37640 TCCAAGGACCTCCACGACTGGGACAACAAGCTCAAC-GACAACGAGCGCCACTTCATCTC 37582 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196 ||| || | |||||||| |||| ||||| || ||||||||||| || || || || | Sbjct 37581 CCACGTTCTCGCCTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTCGA-GC 37523 Query 125197 GATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 ||||| ||| |||| | || |||| ||||| ||||| ||||| |||||| Sbjct 37522 GATTCAGCTCGGAAGTTCAGGCCGCC-GAGGCCCGTTGCTTCTACGGCTTCCAGATCATG 37464 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314 || |||||| | |||||||||| ||||| || || |||| ||||| ||||| || Sbjct 37463 ATGGAGAACATCCACTCGGAAACCTACTCGCTCCTCATCGACACCTACATCCGCGAACCA 37404 Query 125315 --GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGT-GCCGTCTATACGTAAAAA 125371 ||| || || | |||||| |||| |||| || | ||||| | | | || Sbjct 37403 GAGCAGCGCGAA---TTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAG-CAGAA 37348 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAG---TCTTCGTACGCCGACAGACT 125428 ||| | |||| |||| |||||| ||||||| | | | || || | || Sbjct 37347 GGCCGACTGGGCTCTTCGATGGATC---AGCGACAAGCGCGCCACCTTTGCAGAGCGTCT 37291 Query 125429 GGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTG 125488 | || || || ||||| |||||||||||||| || ||| || || ||||||| || Sbjct 37290 CATCGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCTG 37231 Query 125489 GCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGA 125548 |||||||||||| || ||||||||||| || || | |||||| | || || || || Sbjct 37230 GCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGTGA 37171 Query 125549 CGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTG 125608 |||||| || ||| ||||||||| || || || || | | || | | | | Sbjct 37170 CGAGGGTCTTCACACCGACTTTGCCTGCCTCCTCTT---CAGCCACCT-CAAGAAGCGCG 37115 Query 125609 CAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 || | || || | ||| |||| || | | ||| ||||| ||| || | | Sbjct 37114 CACACCC-----CGACACGGTGCTCAAGATCATCAGCGAGGCCGTCGAGATCGAGAAGGC 37060 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728 || || || || | | || |||||| |||| ||||||||| | ||| ||| | | Sbjct 37059 CTTCCTCACAGACGCATTGCCTGTCAGCTTGATCGGCATGAACGCCGCGCTCATGCGTCA 37000 Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATT---TA 125785 ||||| |||| || ||||| || || || | | | | ||| | || || Sbjct 36999 ATACATCGAGTACGTTGCAGACCGCCTTTTG---GTCTCGCTCGGCAACCCTGTTCACTA 36943 Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA-CTAG-AGGGTAAGACCAAC 125843 | ||| | || ||||| || || ||| || | |||| || | | || ||||||||| Sbjct 36942 CGGCGCAACAAACCCCTTCGACTTTATG--GAGAACATCAGCTTGCAAGGCAAGACCAAC 36885 Query 125844 TTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 || ||||||||||||||| ||||||| Sbjct 36884 TTCTTCGAGAAGAAGGTCGCCGAGTAC 36858 >seq33 Length=192376 Score = 172 bits (190), Expect = 8e-38 Identities = 323/472 (68%), Gaps = 2/472 (0%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| ||||| || || || || || | ||| ||||| | || || Sbjct 134175 CGCTACGTTGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTCGCCATCTACATCGAGCCA 134116 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||| ||||||| || || || | || | ||||| ||| || ||||||| Sbjct 134115 TGGCACTCGGACGTGTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGGTG 134056 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 || || | || | || || || ||||||||||| ||| | ||||||||| | ||| | Sbjct 134055 CGTGCTCGTGAGCTCTTCTACGCGCTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAG 133996 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 | ||| ||||| || ||||||||| || || |||||||| |||| |||| Sbjct 133995 CAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGCTAC 133936 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163 ||||| ||||| ||| | ||| | ||||||| ||||| || | | | | Sbjct 133935 GGCGACGAGTTCGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACC 133876 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 ||| | || | |||| || ||| | |||||| | | | ||| |||||| || | || Sbjct 133875 GTCAAGGCGC-AGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACAGAGACCGGCAACCC 133817 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| ||||||||||| | | || || || |||||||| || | ||||| || Sbjct 133816 CTTCATCCTCTACAAGGACGCTGCCAACCGAAAGAGCAACCAGAAGAACCTCGGCACTAT 133757 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 |||| ||||||| |||||||| || || | |||||| | |||| |||||| Sbjct 133756 CAAGTGCTCCAACCTGTGCACCGAGATCATCGAGTACAGCGCTCCCGACGAG 133705 Score = 114 bits (126), Expect = 2e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 98040 TACAAGACTGTCTGGGAGATTCCGACC-AAGACGCTGATCGATATGGCTGCCGACAGAGG 98098 |||||||||||||||||||| | | | ||| | | ||||| |||||||||||| | || Sbjct 132984 TACAAGACTGTCTGGGAGAT-CAGCCAGAAGGCCATCATCGACATGGCTGCCGACCGTGG 132926 Query 98099 TGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCG 98158 || | ||| |||| || ||| |||| | || | | | |||||| | | ||| Sbjct 132925 TGCTTTCATCTGCCAGTCGCAGTCGCTCAACATCCACCTCTCGGCGCCCACGTTCGGTCA 132866 Query 98159 TATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCT 98218 | || ||||| |||||||||| ||||| ||||| |||||||| |||| |||||| || Sbjct 132865 GCTCACCTCGATGCACTTTTACGGCTGGAAGAAGGGTCTCAAGACCGGCACGTACTACCT 132806 Query 98219 GAGAACAAAGTCGGCCACCAATGCCAT 98245 | | || ||| | ||| |||| || || Sbjct 132805 GCGTACCAAGCCTGCCTCCAACGCGAT 132779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740968485090680