Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq13 161 2e-35 >seq13 Length=363028 Score = 161 bits (178), Expect = 2e-35 Identities = 184/246 (75%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||||| | ||||| |||||||| || ||||| ||||| |||||||| ||||| || || Sbjct 169069 CAGATCT-TGCGAGACAACATCCAGGGTATCACTAAGCCCGCTATCCGCCGTCTCGCGCG 169011 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| ||||||| | |||| || |||| || | ||| | || Sbjct 169010 TCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATCTACGACGAGACCCGCGGTGTCCTCAA 168951 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || | ||||||| || | || ||| || |||||||| || || || Sbjct 168950 GCTCTTCCTCGAGTCGGTTATCCGCGACTCGGTCACCTACACTGAGCACGCCAAGCGCAA 168891 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||| |||||||| | || | ||||| || | || || || ||||| | |||| || Sbjct 168890 GACCGTCACCTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTTTACGG 168831 Query 16687 TTTTGG 16692 ||| || Sbjct 168830 TTTCGG 168825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79066246191549