Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq62 140 4e-28 >seq62 Length=98030 Score = 140 bits (154), Expect = 4e-28 Identities = 371/562 (66%), Gaps = 16/562 (3%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||| ||||||||||| | || || |||||||| || ||||| Sbjct 37144 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGA 37203 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct 37204 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAG 37263 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 33480 || || || || ||||||||||| || || | |||| || | ||||| |||| Sbjct 37264 ATGCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCTG 37323 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| ||||||| |||||||||| || || || || || || | ||| | | Sbjct 37324 ATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 37383 Query 33541 AAGAGATAGtttttttCATTACTATCTTT----AACATAAGTATCGATCAAAAGACTATA 33596 ||||| | || | | || | || | || || ||||| | || || Sbjct 37384 AAGAGGAA----TTCGCGCTGCTCTGGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTA 37439 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 ||||||| || ||||| || || ||||| || |||||||| || | ||||||| Sbjct 37440 GGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGC 37499 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 ||| ||||| | | ||||| || | | || || || || || ||||| || Sbjct 37500 GGCCTGAACTTCCGAGCTGAATCGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGC 37559 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTATT-- 33773 || || || || | || || || || | |||| || ||| || || || Sbjct 37560 GGCGAAGAAGGCGAGAACGTGGGAGATGAAGTGGCGCTCGT-TGTCGTTGAGCTTGTTGT 37618 Query 33774 -CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 33832 ||| || | || || || || | || | || || | ||||| || || ||||| | Sbjct 37619 CCCAGTCGTGGAGGTCCTTGGAAAGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGG 37678 Query 33833 CCTTTTTATACATGTTCCAGAT 33854 |||| || ||||| | |||||| Sbjct 37679 CCTTCTTGTACATTTGCCAGAT 37700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622870943475880