Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq11 113 4e-20 seq62 93.3 4e-14 seq2 87.8 2e-12 seq33 82.4 7e-11 >seq11 Length=377427 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || || | |||||| ||||| | ||||| | Sbjct 144713 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTCGAAGTTGAATCCTCC 144772 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| |||||||| || || || || || || Sbjct 144773 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 144832 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| ||||||||| || || || |||||||| || | | | | | | ||||| ||| Sbjct 144833 CAACGACTCATTTTCGCAGGAAAGCAACTCGAGGACGGTCGCACCTTGTCGGACTACAAC 144892 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| || ||| |||||||||| || Sbjct 144893 ATTCAGAAAGAGTCCACTCTCCATCTGGTGCT 144924 >seq62 Length=98030 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/179 (72%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| || ||| ||| |||||| |||||| || ||||| || ||||||||||| Sbjct 37523 GCTCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAGGCGAGAACGTG-- 37580 Query 120385 TAAGAAAAAAT--CGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGA 120442 ||| || | || || || ||||| || || |||| ||| |||| | ||||||||| Sbjct 37581 GGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGGTCCTTGGA 37640 Query 120443 CATGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 | ||||||||| || | ||||| || | | || ||||||||| |||||||| Sbjct 37641 AAGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCCAGA 37699 >seq2 Length=781092 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || || || || | || ||| |||| | || || Sbjct 629480 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCG 629539 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| ||||| ||||| ||||| || || || ||||| Sbjct 629540 GACACCATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 629599 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | || |||||| || |||||||| | | | | | |||||| ||| Sbjct 629600 CAGCGCCTAATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCCGACTACAAC 629659 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||||||| ||||| || |||| || ||| || Sbjct 629660 ATTCAAAAGGAATCCACACTCCACCTTGTCTTG 629692 >seq33 Length=192376 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 148242 CCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAA 148301 || ||||||||||| ||||| ||| |||||| || | ||| ||||| ||| | | Sbjct 133892 CCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCGAACTCGTCGCCGTAGCAGTCGGCGAGA 133951 Query 148302 CCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCAT 148360 ||||| ||||||| ||||||||| | ||||| | || | ||| || ||||||||||| Sbjct 133952 CCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTG-CTCGACCCTCTTCAT 134010 Query 148361 AAACAGATCAGG 148372 || ||||| || Sbjct 134011 GAAGAGATCGGG 134022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478603805738960