Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq62 188 8e-43 >seq62 Length=98030 Score = 188 bits (208), Expect = 8e-43 Identities = 379/559 (68%), Gaps = 5/559 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 37143 GCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAG 37202 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || || || || |||||| || || Sbjct 37203 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 37262 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || || || ||||| ||||| || | | ||| || ||||| | ||| || ||| Sbjct 37263 GATGCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCT 37322 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 ||||||| | |||||| ||||| || | ||| | || | || |||| |||| Sbjct 37323 GATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTC 37382 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 ||| ||| | || |||| || | || || ||||| || ||||| | || || || | Sbjct 37383 AAAGAGGAATTCGCGCTGCTCTGGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAGGT 37442 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 ||| || |||| |||||||| || ||||| |||||||| || | || || | | Sbjct 37443 TTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGCGGC 37502 Query 93451 CTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 ||| ||||| ||| |||| ||| ||||| || || ||||| || || ||||| || | Sbjct 37503 CTGAACTTC-CGAGCTGAATCGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGG 37561 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCC 93566 | || || || | | || || || || ||| | || || ||| || |||| Sbjct 37562 CGAAGAAGGCGAGAACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCC 37621 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | ||| || || || ||||| |||| || || | ||||| || || || || || | Sbjct 37622 AGTCGTGGAGGTCCTTGGAAAGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGCCT 37681 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 37682 TCTTGTACATTTGCCAGAT 37700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556792633277320