Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq91 102 2e-16 seq33 86.0 1e-11 seq10 84.2 4e-11 >seq91 Length=28430 Score = 102 bits (112), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || ||||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 19319 GGAGAGGATCTCTGCAACTGTCAGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTCAAC 19378 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || |||| |||||||||| || |||| ||||| ||||| ||| || | Sbjct 19379 ACCGCCACCCTCCGTCTCAAGCGTGGTCACAGGTACGGTCTTTGCGGTCGCAACGGCTCC 19438 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCT 279518 || ||| || || ||||| ||||| | ||||||||| | || || || ||| Sbjct 19439 GGAAAGTCGACCCTCATGCGTGCCATCACCAACGGTCAGGTCGAGGGTTTCCCT 19492 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 280177 TTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGG 280236 |||| ||||| ||| |||| ||||| || || |||| || | || || ||| || Sbjct 20148 TTGGCCCCAACGGTTCGGGCAAGTCGACGCTCGTCAAGCTCATTGTCGGTGACACCGAG- 20206 Query 280237 CCACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 || ||| ||| |||||||| |||||| || || | |||||||| |||||| Sbjct 20207 CCTGGCTCCGGTGAGTTCTGGAAGCACCCCAACTTGGTCATCGGCTACGTCGCCCAGCAC 20266 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| | ||||| |||| ||||||| | | ||||| | ||||| Sbjct 20267 GCGTTCCACCACATCGACCAGCACCTCGACAAGACTCCTCTCGACTACATGCTCTGGCGT 20326 Query 280356 TA 280357 || Sbjct 20327 TA 20328 >seq33 Length=192376 Score = 86.0 bits (94), Expect = 1e-11 Identities = 364/562 (65%), Gaps = 25/562 (4%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||||| ||| || || |||||||| || ||||| | ||| || | | |||| Sbjct 132904 CTGCGACTGGCAGATGAAAGCACCACGGTCGGCAGCCATGTCGATGATGGCCTTCTGGCT 132963 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGA--ATGCCAATAACCTTC 293232 ||||||||| |||||||||| ||||| | || | ||||| || ||| Sbjct 132964 GATCTCCCAGACAGTCTTGTACAGCTTCTTGA--TGCGGTCGGGGATGCCGGGCACGTTC 133021 Query 293233 TGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACG 293291 ||||| || || |||| ||| || || |||||||||| || ||| ||| || ||| | Sbjct 133022 TGGATGGAACCGCCGTGGGCGATGATGCGGTTCTTCATCGTGTCGTTCCACAGACCCT-G 133080 Query 293292 AGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCG 293351 | | ||||||||| | | | | |||||| || |||| ||||| ||||| || Sbjct 133081 CTCGACGAGCTCGCGAAGCAACCAGGGGTTGACCACCTGGAATTCACCGGCGAGCACACG 133140 Query 293352 ACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGC 293411 ||| ||| ||||| || ||| || ||| ||| | ||| |||||| Sbjct 133141 ACGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACT 133200 Query 293412 AGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACCCTTCTTGACACG 293471 || || ||||||||||| | || | ||| ||||| | | ||| | ||| | Sbjct 133201 GGTCGAAGCGGTAGGCATGGGCGCCAACAGCAGCGAGTTGCGGAGACCGTGCTTA----G 133256 Query 293472 CGAT-------TCGAGACCCGCCCAGTCC-AGAGCAGTCTGA-GGTGTAACACCCCAGAG 293522 |||| | ||| | ||||||||| | || ||| || || || || ||||| | Sbjct 133257 CGATCTTGGTCTTGAGCTCAGCCCAGTCCCACAG--GTCGGAAGGCGTGACGCCCCACAT 133314 Query 293523 ATGATACTGCATGATACCCTTGCT-GGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCAT 293581 | ||||||| | | || ||| ||| || || || | |||| | || ||| | Sbjct 133315 GTCGTACTGCA-GCTCGCCCTGCGAGGCGGGCGAGCCTGCGTAGGTCTCGTAGGTGCCGT 133373 Query 293582 GCTCATCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCT 293641 |||| | | |||||||| ||| ||| | || || ||| ||| ||||||||||| Sbjct 133374 GCTCCTGGGCCAGCTCGCACGATCGCTCGAGGGCGGCGTGGTAGATGGTCTCGAAGATCT 133433 Query 293642 -CACGGTTGAGCTTGCGAGCCT 293662 ||| |||||| |||||||| Sbjct 133434 GCAC-GTTGAGACGGCGAGCCT 133454 >seq10 Length=380723 Score = 84.2 bits (92), Expect = 4e-11 Identities = 206/306 (67%), Gaps = 6/306 (2%) Strand=Plus/Plus Query 217837 TGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGCC 217896 || || |||||||| || || || || || || |||| || |||||| | | | Sbjct 327475 TGTACGCTCATCCTCACGGAAGGTGATTCGGCCAAGTCGCTCGCTGTGGCTGGTATCGTC 327534 Query 217897 GTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCGC 217956 | ||| || || || | || ||| | ||||| |||||||||||||| ||||||||||| Sbjct 327535 GAGGTCGGACGAGACAATTACGGTGTTTTCCCGCTCCGTGGTAAGCTCCTCAACGTGCGA 327594 Query 217957 GATGCCTCGGTTTCAAGCA-TTGCTGCA-AATGCAGAGATTGCCGCCATCAAGCAAATCC 218014 || |||||| | | || | || | ||||| || || ||||||||| | |||| Sbjct 327595 GAAGCCTCG--CACGATCAGATCATGAAGAATGCCGAAATCAAGGCCATCAAGGAGATCC 327652 Query 218015 TGGGTCTTCAGGTTGGAAAGACTTACAAGGATG-CGTCATCTCTGCGTTATGGCTCTGTC 218073 | ||||||||| || ||| || |||| | || || |||| || ||| | || Sbjct 327653 TTGGTCTTCAGCACGGCAAGCAGTATCTCGATGTCAACAGCT-TGCGCTACGGCAGTATC 327711 Query 218074 ATGCTTATGACTGATGCTGATGTTGACGGGTCCCACATTTCCGCCCTCGTTATGAACTTC 218133 ||| | ||||| ||| ||| || || || ||||| | ||| | || |||||| Sbjct 327712 ATGATCATGACCGATCAGGATCACGATGGTTCGCACATCAAAGGTCTCATCATCAACTTC 327771 Query 218134 TTCCAC 218139 || || Sbjct 327772 CTCGAC 327777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027707834425913