Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq11 179 7e-40 seq2 179 7e-40 seq62 163 5e-35 seq1 132 9e-26 >seq11 Length=377427 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || || || Sbjct 224474 CCACCACGCAGGCGAAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 224533 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || || || || ||| Sbjct 224534 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGGA 224593 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| ||||||||| ||||||||||| | || || || Sbjct 224594 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACC 224653 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||||||| ||||||||||||||||| || |||||||| Sbjct 224654 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 224700 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | |||| || || ||||||||||| || ||||| || || || Sbjct 144939 CCTCCACGGAGACGGAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGAC 144880 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | ||||| || ||||| ||||||| ||| ||||| || || Sbjct 144879 AAGGTGCGACCGTCCTCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGGG 144820 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || ||||| || ||||| ||||||||| ||||||||||| | ||||| ||| Sbjct 144819 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACT 144760 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || | |||||||||||| |||||||| Sbjct 144759 TCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||| | || || || ||||| || |||||||| || || || Sbjct 144711 CCACCTCGGAGACGGAGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAC 144652 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| | |||||| ||||| || ||||| | || || || || ||| Sbjct 144651 AAGGTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGGGA 144592 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| ||||||||| || || ||||| | || || || Sbjct 144591 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGACC 144532 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||| |||||||| || |||||||| Sbjct 144531 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 144485 >seq2 Length=781092 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 |||||||| | ||||| || | ||| || ||| ||| ||||| ||||| |||||| Sbjct 629934 CCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTC 629875 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||||| || |||||||| || Sbjct 629874 AGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGG 629815 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || || || ||||||||| || || ||||| | || || ||| Sbjct 629814 ATACCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 629755 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| ||||| ||||| ||||||||||| |||||||| Sbjct 629754 TCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 176 bits (194), Expect = 8e-39 Identities = 183/240 (76%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 68222 GTGATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGAT 68281 ||| ||| | || || || || || || | || | ||| || ||| ||| || ||||| Sbjct 630175 GTGCTTTCAGTTACCGCCACGCAGACGGAGGACGAGGTGCAGAGTGCTCTCCTTCTGGAT 630116 Query 68282 GTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTG 68341 ||| || ||||| ||||| | ||||| || | |||||| || || || ||||||| || Sbjct 630115 GTTGTAGTCGGACAGTGTACGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTG 630056 Query 68342 TTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 ||||||||||| || || |||||||| || ||||| |||||||| ||||| ||||| Sbjct 630055 CTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTC 629996 Query 68402 TGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||| ||||| || || || ||||| ||||||||||| |||||||| Sbjct 629995 TGAAGACTCGACTTCCAACGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || |||||||| || || ||| Sbjct 629478 CCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 629419 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||| | || ||||| || || Sbjct 629418 AGCGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGG 629359 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||||||| || |||||||| | || || || Sbjct 629358 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 629299 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || || ||||||||||| |||||||| Sbjct 629298 TCGAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 629252 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| || | ||| || ||||| || ||||| ||||| || ||||| Sbjct 629706 CCACCACGGAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAA 629647 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| || || | || || || || ||| Sbjct 629646 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGA 629587 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| || |||||| || |||||||| | || || || Sbjct 629586 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAACC 629527 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || || || | ||||||||| || |||||||| Sbjct 629526 TCGAGGGTAATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 >seq62 Length=98030 Score = 163 bits (180), Expect = 5e-35 Identities = 543/830 (65%), Gaps = 25/830 (3%) Strand=Plus/Plus Query 9971 CTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 |||||||||||||| |||||| | | | ||| |||||| ||||| |||||||| Sbjct 36876 CTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTTCTCCATAAAGTCGAAGGGGTTTGT 36935 Query 10031 GGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGAT 10090 ||||| | || |||| ||||| | |||| |||||| || ||| ||||||| Sbjct 36936 TGCGCCGTAGTGAACAGGGTTGCCGAGCGAGACCAAAAGGCGGTCTGCAACGTACTCGAT 36995 Query 10091 GTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGC-GGCAGGGGATGGCGTCGCAAA 10149 ||| || | ||| || | | ||||||||| |||| || | |||| || ||||| | Sbjct 36996 GTATTGACGCATGAGCGCGGCGTTCATGCCGATCAAGCTGACAGGCAAT-GCGTCTGTGA 37054 Query 10150 TGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCAC---GTCAAGGG 10206 |||| |||| ||| | |||| | ||||| |||| |||| | ||| ||| ||| Sbjct 37055 GGAAGGCCTTCTCGATCTCGACGG---CCTCGCTGATGATCTTGAGCACCGTGTC-GGGG 37110 Query 10207 ACAGCTTG-TTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCG 10265 || | |||| ||| | | ||||| |||| | ||| || |||||| Sbjct 37111 TGTGCGCGCTTCTTGAGGTGGCTGAAGAGGAGGCAGGCAAAGTCGGTGTGAAGACCCTCG 37170 Query 10266 TCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGC 10325 || || ||||| ||||||||| || |||||||||||||| || || || ||| Sbjct 37171 TCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGC 37230 Query 10326 CAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACGCACACCCAGGCGA 10383 ||||| |||| | ||| || || |||| |||||| ||||| ||| | |||||| Sbjct 37231 CAGAAGATGGAGGCGAAGGAACCAGAGA--AGAAGATGCCCTCGACGGCAGCAAAGGCGA 37288 Query 10384 CGAGGCGCTCTGCGAA---GGAGCGGTCG-CGCGAAAAGTATTTCGA--GGCCCACGCTG 10437 ||| |||||||| || || ||| | | ||| | | |||| ||||| | | Sbjct 37289 TGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCTGA---TCCATCGAAGAGCCCAGTCGG 37345 Query 10438 CCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCT 10497 |||||| ||| | ||||| ||||||| || || ||||| | |||| | ||| Sbjct 37346 CCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAATTCGCGCT-GCTCT 37404 Query 10498 CGTCCTC-AATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTG 10556 || | | || | || | ||| || ||||| || ||||| | |||| | Sbjct 37405 GGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAGGTTTCCGAGTGGATGTTCTCCATC 37464 Query 10557 TACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTG 10616 |||| | ||||||| ||| ||| || | || |||||| | || Sbjct 37465 ATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGCGGCCTGAACTTCCGAGCTGAATCGC 37524 Query 10617 TTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTG 10676 | | |||||||| | || ||||| ||| | || |||||| |||| | ||| | Sbjct 37525 TCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAGGCGAGAACGTGGGAG 37584 Query 10677 ATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGC 10736 |||||||||||||| | ||||| || || | |||||| | |||| | || Sbjct 37585 ATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGGTCCTTGGAAAGG 37644 Query 10737 TGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 | || |||||| |||||||||| | || |||||||||||||||| || Sbjct 37645 TCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTG 37694 >seq1 Length=1046041 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| || || ||||| || |||||||| || || || Sbjct 845833 CCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 845774 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || |||||||| || Sbjct 845773 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 845714 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| |||||||| ||||||||||| | || || || Sbjct 845713 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 845654 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 845653 TCAAGGGTGATGGTCTTACCTGT 845631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921509581897960