Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq10 143 6e-29 >seq10 Length=380723 Score = 143 bits (158), Expect = 6e-29 Identities = 919/1424 (65%), Gaps = 70/1424 (5%) Strand=Plus/Minus Query 297158 TCTTCGATCTTACCTTTGAATCCTCGATACCACGGTTTCATTTCGACGAGATCTTCTCCA 297217 ||||||| | || |||| || || |||| || |||||| ||||| ||||| ||| Sbjct 328772 TCTTCGACATCGCCGGTGAAGCCGCGGAACCAGGGCTTCATTGGGACGACGTCTTCGCCA 328713 Query 297218 GCAATCAATCGCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTC 297277 || || || || |||| | ||||| || | || ||||| | || | ||| Sbjct 328712 GCCATGCGTCTGCGCAAGTTGGCGACGATCTCGTGCGGGTTGTAGTTGGGCACCGAAGTG 328653 Query 297278 GACCAACCGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACA 297337 ||||| || |||||||| || | ||| |||| || | || | ||||| | Sbjct 328652 GACCATCCCGTACCGATACCTTCGGCACCGTTCATGAGCACCTGAGGTACCACAGGGATG 328593 Query 297338 TAATACTCTGGTTCGATCTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCC 297397 || | | || || | ||| | |||||| || | || |||| || || ||||||| Sbjct 328592 TACCAGTGAGGCTCCACCTTTTGACCGTCGTCCTCGAGGTATTCGAGCAGCGCATCGTCC 328533 Query 297398 GTATCGACGAAAACCTGTCGAGTCTGA----GGGTTCAGTTTTGTGAAAATATATCGTGC 297453 | | || |||| | | || || || ||| ||| |||||||||||| ||| | Sbjct 328532 GCTT-GAGGAAA-CAGGGCGCGTGCGATCTTGGG--CAGGGCTGTGAAAATATAACGTCC 328477 Query 297454 ACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCA 297513 ||| ||| ||||| || |||||| || |||||| |||||| ||| | | | Sbjct 328476 TGAGGCGGCATCTTTACCGCCGAGCAATCGCGTACCGAATTGGCCCCTTGGCTCGAGCAA 328417 Query 297514 GTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGC--AGA 297571 ||||| ||| ||||| ||||| | | ||| || || || ||||| | ||| || Sbjct 328416 GTTGACGTTGTTGCTACCGACGAAGTTCTGGGCGAGACCGACAATGGT--CATGCTGAGC 328359 Query 297572 GATGCTTCGCCATGGTGATAGGC-GCTATGCTCTGCAACGTAACCGCTGAAC-TGTGCAA 297629 | |||||| || ||||| || || ||| || | |||| ||| || | ||| | | Sbjct 328358 GCTGCTTCACCGTGGTGGTAAGCTGCT-TGGCCCAAGACGTTACCAACGAGCGTGTTC-A 328301 Query 297630 CCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGA-ATATATCACTTTCCGTTGAGAA 297688 |||||| |||| | ||||| | | || ||| || || || || || ||| | Sbjct 328300 CCTTCAACTCGGAGTTGCTCTTGCGGTCG-AACATGACGTACATGACCTTTCGCTGACCA 328242 Query 297689 GGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCG----CGAGAA 297744 ||||||| ||| || |||||||| || ||| ||| || | || ||| |||||| Sbjct 328241 GGTTTGAGACCGTCGACGACCGAAGGGATGGATCG---AAGGTTGT-CCGCCATCGAGAA 328186 Query 297745 CAAAATAAGTTCCTTGTCGATGAAGTCGGGA-ACGGGAACCTCGGGCTTCTTGTGGTCAA 297803 | || || ||||||| ||| ||||||| | ||||| | || | | | |||||||| | Sbjct 328185 GAGGATGAGCTCCTTGTTGATAAAGTCGGCATACGGG-ATCTTGTCCGTATTGTGGTCGA 328127 Query 297804 GTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTCGGC--TCGTGACT 297860 | | | || ||| | | || || | ||||||||| ||||| ||||| || | || Sbjct 328126 GGTAGGTGCCAGGTCGGAACTGACG-GAGCCACTCCTTTCGATCGTCGGCCTTCTT--CT 328070 Query 297861 TGTTGAAAGAACGGTCAATGAGCTCTC---CGGAATCGGAAGTCCACAT-AAACGTCTTC 297916 ||||||| | |||| |||||||| | || ||| ||| |||| || | | | Sbjct 328069 TGTTGAAGGCGAGGTCGATGAGCTCGCGATCGCCATCACGAGT-GACATCGAAGGCCAGC 328011 Query 297917 ATGAGAGACTTC-AGATTGCT--GAAGTATTTTTTGGCAT-CTGC-ACTGGAACTCGTAC 297971 || | |||| || ||| |||||| | ||||| | |||| ||| | | ||||| Sbjct 328010 TTGTG---CTTCTCGAGGGCTCGGAAGTACCTCTTGGCGTCCTGCGACTCGGA--CGTAC 327956 Query 297972 CAAGCCCCTTAAAATACTTGGTCGTCCATTTCTT-CATATCTTGTG-TCTT--CACGAAG 298027 | || ||||| | |||||| | |||| ||| | ||||| | | | | | | Sbjct 327955 CGAGACCCTTGTAGTACTTGATGTGCCATCCCTTGCCGCCATTGTGCGCGTCCCTCCAGG 327896 Query 298028 TCTTCGAAGTCAGGAAGACTGAAAAATTCTCTGA-CTTCTTTTCCCTTCCTGGCAACT-A 298085 || ||| | || || | |||| || | || | | || |||||||| ||| || | Sbjct 327895 TC-TCGTACTCGGGGATGGTGAAGAA-CGACAGATCCTGCTTGCCCTTCCT-GCACCTGA 327839 Query 298086 CGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAGC 298145 |||| ||||||||||||| | ||| || || || | || || ||| | || Sbjct 327838 CGATGGGCGTGATGAACTCGACGAGGAAGCCGGGGATCTTGAGCAGCGACGGGTAGAAGT 327779 Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205 | || ||||| |||| |||||| ||||| | || || |||| ||||||| Sbjct 327778 GGTCGAGGAAGTTGATGATGAGACCTTTGATGTGCGAACCATCGTGATCCTGATCGGTCA 327719 Query 298206 TGATCATCACATGACCGTAACG-AAGC-GAGGACGTGTCTTTGTACACTTTACCGGTTTG 298263 ||||||| | | ||||| || |||| | ||| || ||| || ||| || Sbjct 327718 TGATCATGATACTGCCGTAGCGCAAGCTGTTGAC--ATCGAGATACTGCTTGCCGTGCTG 327661 Query 298264 AAGGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG-G 298322 ||| || || || | |||| || ||||||| | |||||| |||| || | | | Sbjct 327660 AAGACCAAGGATCTCCTTGATGGCCTTGATTTCGGCATTCTTCATGAT-CTGATCGTGCG 327602 Query 298323 ATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGAC 298382 | || || || || || | || || ||||| || ||||| || || || | || || | Sbjct 327601 AGGCTTCTCGCACGTTGAGGAGCTTACCACGGAGCGGGAAAACACCGTAATTGTCTCGTC 327542 Query 298383 CGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGA 298442 ||||| || | || || | || || | | || ||||| || ||||| || |||| Sbjct 327541 CGACCTCGACGATACCAGCCACAGCGAGCGACTTGGCCGAATCACCTTCCGTGAGGATGA 327482 Query 298443 GAGTGCACATTTTGCTGTTATTCGTTCCA--GCCCATG-TAGCATCGTTGAGTTTGGGAA 298499 | || || || || || ||| | ||| | | || | ||||| | ||| ||||| | Sbjct 327481 GCGTACA-ATCTT--TGGCCTTCCTGCCACCGGCGTTGTTGGCATCTTCGAGCTTGGGGA 327425 Query 298500 TTCCAGTCACTCGGATCTTCTTGGTACCGTCGGTCTTCTTCAGC 298543 | || | | | | |||| ||||||||||||||| ||| Sbjct 327424 TGTTGGTGATCCTGGTGCGCTTGTGACCGTCGGTCTTCTTGAGC 327381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102741618544550