Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq33 203 4e-47 seq10 149 7e-31 seq62 132 6e-26 >seq33 Length=192376 Score = 203 bits (224), Expect = 4e-47 Identities = 900/1400 (64%), Gaps = 45/1400 (3%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| |||||| ||||| |||||||| ||| || | ||| || ||| || Sbjct 133148 TAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAA 133207 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC---CTTTTCCCTAATGCGT 114058 || || |||||||| |||| || || ||| |||||||| ||| | | || || Sbjct 133208 GCGGTAGGCATGGGCGCCAACAGCAGCGAGTTGCGGAGACCGTGCTTAGCGATCTTG-GT 133266 Query 114059 TCCTTGAGGGCGTCCCAGTCGTA---GTTG--AGCTTTGTCTCCCCCTGCCACATATCAA 114113 |||||| | ||||||| | || | || || | |||| |||| || Sbjct 133267 --CTTGAGCTCAGCCCAGTCCCACAGGTCGGAAGGCGTGACGCCCC-----ACATGTCGT 133319 Query 114114 ACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT 114173 |||| || || || ||||| ||||| || | | |||||||| | ||| | ||| Sbjct 133320 ACTGCAGCTCGCCCTGCGAGGCGGGCGAGCCTGCGTAGGTCTCGTAGGTGCCGTGCTCCT 133379 Query 114174 CCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232 |||| ||| | | |||| |||||||| ||||| || || ||||| || || | | Sbjct 133380 GGGCCAGCTCGCACGATCGC-TCGAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCACG 133438 Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGTCGGCACAAA-ATAAATACATCCG 114290 || | |||||| || || || ||| || | || | || || | || | Sbjct 133439 TTGAGACGGCGAGCCTCGGGCGATTCGAAGGCGTAGCC--CATGATCATGAAGGCGTCGG 133496 Query 114291 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 114350 ||||||| |||||||||| ||| || |||||||| | ||| || ||| | || || || Sbjct 133497 CGAGACCCTGGACACCGATGCCGATAGGGCGATGGCGCATGTTGGACCTGCGGGCCTCCT 133556 Query 114351 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410 | ||||| || | || | ||||| | | | || || || ||| || |||| | || Sbjct 133557 CGACGGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTCTTGCAGATGGCCTTGGCGA 133616 Query 114411 TTTCATGAAGCTTTTCGTAATC--AAAACTGCGAGTCTCT-TCATTGACATACTTAGGAA 114467 || || | | | || | | || | | | || ||| | | |||| Sbjct 133617 CACTGTGGAGGCGCTTGAAGTCGTAGACCTTGGTGACGGGGTCGATGA---AGGTGGGAA 133673 Query 114468 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 |||| || || || || || || || | | ||| || | | ||||||| || || | Sbjct 133674 GGGCAATGGAGGCAAGGTTGCAGACGGCGACCTCGTCGGGAGCGCTGTACTCGATGATCT 133733 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | || |||| || || | ||| || ||||| | |||||| || || |||| ||| Sbjct 133734 CGGTGCACAGGTTGGAGCACTTGATAGTGCCGAGGTTCTTCTGGTTGCTCTTTCGGTTGG 133793 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 || |||||||| || ||| | || | || ||||| || || |||| ||| || || | Sbjct 133794 CAGCGTCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCTGTCTGCGACTCGAGGATGGCGT 133853 Query 114648 TCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 114706 ||||| | || ||| || | || ||| |||| || ||||| ||||||| | Sbjct 133854 ACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCG 133912 Query 114707 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 114766 |||||| || ||||| || || | || | ||| || || || | ||||| Sbjct 133913 TAGAGGCGCTCGAACTCGTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCAC 133972 Query 114767 AAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGA 114826 | ||| ||||| | || || ||| || | |||||||||||| || || | |||||| Sbjct 133973 ATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGC 134032 Query 114827 GCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886 || ||||||| || ||| || | ||||| | || || || || | || | Sbjct 134033 GCGTAGAAGAGCTCACGAGCACGCACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGG 134092 Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTA 114940 || || | | |||| |||||| || || | ||| | |||| | || | ||| Sbjct 134093 AACTCGAACACGTCCGAGTGCCATGGCTCGATGTAGATGGCGAAGGCACCGGGGCGCTT- 134151 Query 114941 CGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 | | ||| |||||| || || | ||| ||| || || ||||| ||||| || | | Sbjct 134152 -GTTG-CCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGAAGACGCGGAGCATGGGGACG 134209 Query 115001 ATACCAT--CAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCAT 115058 ||||||| | || || || || || ||| || | | | || | Sbjct 134210 ATACCATTGCTGA--CACCGTTGGTGCCGGCAATGTAGGATCCGGTACCGCGGATGCAGT 134267 Query 115059 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 115118 |||||| | || ||||| || || ||| ||||| || ||| | |||| || Sbjct 134268 GGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGT 134327 Query 115119 CGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTG 115178 ||||||| |||||||||||||| |||| | | || ||||||||| ||| | || | Sbjct 134328 CGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACAAGGAAGCACGACGAGAGCTGCG 134387 Query 115179 GCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGAC 115237 | ||| |||||||||||||||||||| || | |||||| |||| ||| ||| ||| Sbjct 134388 GGTGTGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTTTGCGAC 134446 Query 115238 ATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 115297 || | ||| ||||| | | || ||||| | ||||| || |||| | ||| Sbjct 134447 ATGAGGTTGTACGTCTCGATGGCGCTCTCGATGTCCTGGCCGTGGATTCCGACGGCGACA 134506 Query 115298 CGCATAAACATGTATTGGGG 115317 ||||| | ||||| ||||| Sbjct 134507 CGCATGAGCATGTGCTGGGG 134526 >seq10 Length=380723 Score = 149 bits (164), Expect = 7e-31 Identities = 307/449 (68%), Gaps = 22/449 (5%) Strand=Plus/Minus Query 172576 CTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGA 172635 |||||| || || || |||||| || || | || | ||||||||| || ||||| || Sbjct 327801 CTTGAGCAGCGACGGGTAGAAGTGGTCGAGGAAGTTGATGATGAGACCTTTGATGTGCGA 327742 Query 172636 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG-AAGCTCGGAAACAT 172694 |||||||| |||| ||| ||||| ||||| | | || ||||| ||||| | |||| Sbjct 327741 ACCATCGTGATCCTGATCGGTCATGATCATGATACTGCCGTAGCGCAAGCT-GTTGACAT 327683 Query 172695 CTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGT 172754 | |||||| ||| || || |||||||| | ||||| ||||| | |||| || | Sbjct 327682 CGAGATACTGCTTGCCGTGCTGAAGACCAAGGATCTCCTTGATGGCCTTGATTTCGGCAT 327623 Query 172755 T-----TGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAG 172809 | |||| ||| | | || || || || || || || ||| |||||||| Sbjct 327622 TCTTCATGATCTGA-TCGTGC----GAGGCTTCTCGCACGTTGAGGAGCTTACCACGGAG 327568 Query 172810 AGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTT 172869 ||||| |||||||| | || || || ||| | | |||||| || ||||| | ||| Sbjct 327567 CGGGAAAACACCGTAATTGTCTCGTCCGACCTCGACGATACCAGCCACAGCGAGCGACTT 327508 Query 172870 CGCGGAATCACCCTCCGTCACGATGAGCGTACA--CTTTCCAGATTGTGCCGTCCCCGCC 172927 || |||||||| ||||| | |||||||||||| |||| | |||| || || Sbjct 327507 GGCCGAATCACCTTCCGTGAGGATGAGCGTACAATCTTTGGCCTTCCTGCC--ACCGGCG 327450 Query 172928 TTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTTGCG---GGCACCATCT 172984 ||||| ||||| || | |||||| || || || ||| |||| | ||| || Sbjct 327449 TTGTTGGCATCTTCGAGCTTGGGGATGTTGGTGATCCTGG---TGCGCTTGTGACCGTCG 327393 Query 172985 GTCTTCTTGAGTTCCTTCATCTCCTTGAA 173013 ||||||||||| ||| || |||||| Sbjct 327392 GTCTTCTTGAGCGCCTGGTCCTGCTTGAA 327364 >seq62 Length=98030 Score = 132 bits (146), Expect = 6e-26 Identities = 306/454 (67%), Gaps = 8/454 (2%) Strand=Plus/Plus Query 125757 CGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCA 125816 |||| || | ||| ||||||||||||||| ||||| || | ||||||||| ||||||| Sbjct 36857 CGTACTCGGCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTTCTCCA 36916 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTT--GGCACCCCAATCTGTTTGAGGAG 125874 |||| || || ||||| ||| | || | || || || | | | || Sbjct 36917 TAAAGTCGAAGGGGTTTGTTGCG--CCGTAGTGAACAGGGTTGCCGAGCGAGACCAAAAG 36974 Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934 || || | |||||||| ||||| | | ||| | | | |||||| ||||| | | | Sbjct 36975 GCGGTCTGCAACGTACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCGATCAAGCT 37034 Query 125935 -ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGG 125993 ||| || | ||||| || ||| ||||||| || || ||||| || | | ||| Sbjct 37035 GACA-GGCAATGCGTCTGTGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGATGATCT 37093 Query 125994 CGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCT-TGAAGAGTTCCACGGCAAAC 126052 | | | ||||| | | || | | || ||||||| |||||| Sbjct 37094 TGAGCACCGTGTCGGGGTGTGCGCGCTT-CTTGAGGTGGCTGAAGAGGAGGCAGGCAAAG 37152 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| |||||||||||||| |||||||| || || |||||| || || |||||| Sbjct 37153 TCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATG 37212 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 ||||| |||||||| | |||||| || | || ||||| ||||||||||| ||||| Sbjct 37213 AGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATGCCCTCG 37272 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || || || || | ||||||||| ||||||| Sbjct 37273 ACGGCAGCAAAGGCGATGAGACGCTCTGCAAAGG 37306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597280476452440