Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq11 116 4e-21 seq2 114 1e-20 >seq11 Length=377427 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| ||||| || || || |||||||| || | | |||||| ||||| Sbjct 144696 AGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTGCGGCCGTCT 144637 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| |||||| | ||||| |||||||| || || ||||| ||||| || || Sbjct 144636 TCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 144577 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || || || | || | |||| Sbjct 144576 TGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 144517 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | ||| || || || || ||||| Sbjct 144516 TTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 144485 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||| | || || ||||| ||||||||||| || | | |||||| |||| Sbjct 144924 AGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGACAAGGTGCGACCGTCC 144865 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || || ||||||| || |||||||| || || || || ||||| || Sbjct 144864 TCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 144805 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || ||||| | || | |||| Sbjct 144804 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCGAGGGTGATGGTC 144745 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| || || ||||| || ||||| Sbjct 144744 TTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 >seq2 Length=781092 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||||| | ||| || |||| || || ||||||||||||||||| Sbjct 629935 ACCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCT 629876 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || |||||||| || ||| | ||||| ||||||||||||||||| Sbjct 629875 CAGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGG 629816 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || ||||| ||| || || | || || | || || Sbjct 629815 GATACCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGAC 629756 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||| || || | || || |||||||| ||||| Sbjct 629755 TTCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 109 bits (120), Expect = 5e-19 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| |||||||||||||| || | | |||||| ||||||| |||||||||||| Sbjct 629676 GTGGATTCCTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCG 629617 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || |||||||| || || ||||| ||||| || || || | | || ||||| Sbjct 629616 GCGAAGATTAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGA-TCTTGGCTTT 629558 Query 64367 -ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 || || | || | ||| || || || || | || | ||||||||||||||| Sbjct 629557 GACGTTGTCAATGGTGT--CCGACGACTCAACCTCGAGGGTAATGGTCTTGCCGGTCAAG 629500 Query 64424 GTTTTTACGAAAATTTGCAT 64443 || || || || || ||||| Sbjct 629499 GTCTTGACAAAGATCTGCAT 629480 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || || || |||| || |||||||| ||| Sbjct 629448 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGTCCGTCCTCGAGCTGCTTTCCG 629389 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || ||||||| ||||||||||| ||||| || || || || || || || || ||| Sbjct 629388 GCGAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 629329 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | ||||| || | || | ||||||||||||| ||| Sbjct 629328 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGAGTC 629269 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 629268 TTGACGAAGATCTGCAT 629252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499583637230920