Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 seq11 93.3 4e-14 >seq2 Length=781092 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | ||| || || || || || ||||||||||| || || || ||| Sbjct 629709 ATACCACCACGGAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCG 629650 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || || | || || || ||| | || | || ||||| || || Sbjct 629649 GAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGG 629590 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || || || || || ||||| || | || | |||||| || ||||| Sbjct 629589 GGAATGCCTTCCTTGTCCTGGATCTTGGCTTTGA-CGTTGTCAATGGTGTCCGACGACTC 629531 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| |||| || |||||||| | || || ||||| || ||||| Sbjct 629530 AACCTCGAGGGTAATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || |||||||| | | |||||| || || || || |||||||| || || |||||| Sbjct 629937 ATACCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCG 629878 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| | ||| || | || || || || | || | ||| |||||||| || Sbjct 629877 CTCAGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGA 629818 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || || || ||||| |||| || | || | ||||| |||||||| Sbjct 629817 GGGATACCTTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTC 629759 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| | || | || || || || || || || || ||||| ||||| Sbjct 629758 GACTTCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || ||||| ||| | || | || |||||||| || || ||||| || || || || || Sbjct 629397 TGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATC 629338 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || |||| || | || | ||||||||||||||| || ||||| || | || ||||| Sbjct 629337 TTGGCCTTGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCC 629279 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 ||| ||||| || || || || ||||| || Sbjct 629278 GGTCAGAGTCTTGACGAAGATCTGCATGGC 629249 >seq11 Length=377427 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| ||||| | | ||| ||||| || || || || || || || || || || Sbjct 144939 CCTCCACGGAGACGGAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGAC 144880 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | || || | ||| ||||||||| | || | |||||||||||| || || Sbjct 144879 AAGGTGCGACCGTCCTCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGGG 144820 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| ||||| || || || || |||| || | || | ||||||||| || || || Sbjct 144819 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGGATTCAAC 144761 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || | || ||||| || | || || || || || ||||| Sbjct 144760 TTCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || || ||||| ||||| || || || Sbjct 144714 ATACCACCTCGGAGACGGAGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCC 144655 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || || | || ||||| || | || | || ||||| || || Sbjct 144654 GACAAGGTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGG 144595 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || || ||||| || |||| || | || | |||||||| ||||| Sbjct 144594 GGAATGCCTTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCAATAGTGTCGGAGGACTC 144536 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| || | || |||||||| ||||| || ||||| || |||||| Sbjct 144535 GACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCATC 144484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451947869158280