Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq62 156 7e-33 >seq62 Length=98030 Score = 156 bits (172), Expect = 7e-33 Identities = 548/844 (65%), Gaps = 19/844 (2%) Strand=Plus/Plus Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATG--GATATTGATTCCATGAACCCGA 159701 || ||||||||||| |||||||||||||| | || | ||| || ||||| || ||| Sbjct 36868 ACCTTCTTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTTC--TCCATAAAGTCGA 36925 Query 159702 ATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCA 159761 | ||||| | || ||| | || ||||| | ||| | | |||||| | Sbjct 36926 AGGGGTTTGTTGCGCCGTAGTGAACAGGGTTGCCGAGCGAGACCAAAAGGCGGTCTGCAA 36985 Query 159762 CAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 | | |||||||| || ||| || | ||| || || | || || || || | | Sbjct 36986 CGTACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCGATCAAGCTGACAGGCAATG 37045 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | || || ||||||| |||||||| || ||| | | |||| ||| ||| Sbjct 37046 CGTCTGTGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGATGATCTT-GAG-CAC--- 37100 Query 159882 CGTACCCCGGCTTGCCCAAAA--TGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTG 159939 ||| | || ||| | || ||| | || |||||||| ||||||||| ||| Sbjct 37101 CGTGTCGGGGTGTGCGCGCTTCTTGAGGTGGCTGAAGAGGAGGCAGGCAAAGTCGGTGTG 37160 Query 159940 CAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACG 159999 || |||||||| || ||||||| ||||||||| | | |||| || ||||||| ||||| Sbjct 37161 AAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACG 37220 Query 160000 CGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGC 160059 | |||||||| || |||| || || | ||| || ||||| ||||| ||||| || Sbjct 37221 CTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATGCCCTCGACGGCAGC 37280 Query 160060 AAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCA 160119 ||| || | ||| | ||| |||| | |||| |||| | |||| | ||||| Sbjct 37281 AAAGGCGATGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCTGATCCATCGAAGAGCCCA 37340 Query 160120 TTCAGCCTTCT--TTG-CGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTG 160176 || ||||||| ||| ||| | || ||| ||||||||||| ||| | || | Sbjct 37341 GTCGGCCTTCTGCTTGACGACG---GGGATGGTCTCGACGGCGTCAAAGAGGAATTCGCG 37397 Query 160177 CTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATT 160236 || || || ||| || | || || |||||| |||| | ||| | || Sbjct 37398 CTGCTCTGGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAGGTTTCCGAGTGGATGTT 37457 Query 160237 TTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGT 160296 || || ||||| ||| |||||| | ||||| ||| || ||| | Sbjct 37458 CTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGCGGCCTGAACTTCCGAGCT 37517 Query 160297 GAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACAC 160356 ||| | | | || || | || || | ||||||| || || ||||| || | || Sbjct 37518 GAATCGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAGGCGAGAAC 37577 Query 160357 GTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTT 160415 ||| |||||||| || | ||||| | |||||| | || ||||||| ||| | ||| | Sbjct 37578 GTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTG-GAGGTCCT 37636 Query 160416 GGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCC 160475 || | || | ||| || ||| |||| || ||||| || | |||||||| || Sbjct 37637 TGGAAAGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCC 37696 Query 160476 AGAT 160479 |||| Sbjct 37697 AGAT 37700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795057863064080