Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq62 363 2e-95 seq11 136 4e-27 seq2 127 2e-24 seq1 95.1 1e-14 >seq62 Length=98030 Score = 363 bits (402), Expect = 2e-95 Identities = 592/840 (70%), Gaps = 17/840 (2%) Strand=Plus/Plus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || ||| | ||||| ||||| || || || || || || | |||| ||| | |||| Sbjct 36859 TACTCGGCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTTCTCCATA 36918 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTG--CTTGGT-GCCGATCAGGTCGACGAGCAGC 132726 || || |||||||| | || | |||||| | ||| ||||| | | || | || Sbjct 36919 AAGTCGAAGGGGTTTGTTGCGCCGTAGTGAACAGGGTTGCCGAGCGAG---ACCAAAAGG 36975 Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGC 132786 | ||| || ||| ||||||||||||| |||| || || | || | || | Sbjct 36976 CGGTCTGCAACGTACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCGATCAAGCTG 37035 Query 132787 ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCC 132846 || |||| || || ||||| ||| | |||||| |||| || ||| ||| ||| | Sbjct 37036 ACAGGCAATGCGTCTGTGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGATGATCTTG 37095 Query 132847 CTAACGCGCGCCGCGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTC 132905 || || | || | | || || | | | || |||| | | ||| |||||||| Sbjct 37096 AGCAC-CGTGTCGGGGTGTGCGCGCTTCTTGAGGTGGCTGAAGAGGAGGCAGGCAAAGTC 37154 Query 132906 GCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAG 132965 | || | |||||||| | || ||||| |||||| ||| || | ||||||||||| Sbjct 37155 GGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAG 37214 Query 132966 GCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGAC 133025 || || || |||||||| || |||| |||||| || || ||||||| ||||||||| Sbjct 37215 ACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATGCCCTCGAC 37274 Query 133026 GGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAG 133085 ||| || || || | || ||||| | || ||||| ||| | |||||| || || Sbjct 37275 GGCAGCAAAGGCGATGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCTGATCCATCGAAG 37334 Query 133086 CGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAG 133145 ||||| |||||||| | |||||| || || || |||| ||||| ||| | | | | Sbjct 37335 AGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGT-CAA-AGAGGAAT 37392 Query 133146 TTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGT 133203 | | || | || ||| | |||||||||||||||| ||| || |||||||||| Sbjct 37393 TCGCGCTGCTCTGGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAGGTTTCCGAGTGG 37452 Query 133204 ACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCT 133263 | ||||||||| ||| || |||||||| ||||| || |||||| | |||| ||||| Sbjct 37453 ATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGCGGCCTGAACTTC- 37511 Query 133264 TGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGC 133322 |||| ||| |||||||| || || |||||||||||||||||| |||||||| ||||| Sbjct 37512 CGAGCTGAATCGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAGGC 37571 Query 133323 CAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGT 133379 || ||||| |||||| ||||||||||||||||| | | ||||||||| | Sbjct 37572 GAGAACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAG 37631 Query 133380 GTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||||| ||||| | |||||| ||||||| || || |||||||| || |||||||| Sbjct 37632 GTCCTTGGAAAGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACAT 37691 >seq11 Length=377427 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || ||||||||||||||||||||| |||| || ||| || Sbjct 224703 AAGATGCAGATCTTTGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTGGAGTCC 224644 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| ||||| || || |||||| | || Sbjct 224643 TCGGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGA 224585 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| ||||| | ||| || || ||||| || |||| |||||||| ||||| Sbjct 224584 TCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTA 224525 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| |||| || || | ||||| || Sbjct 224524 CAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTTCG 224486 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||||||| |||| |||||| || || Sbjct 144485 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCC 144544 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| || || |||||| | || || Sbjct 144545 GACACTATTGACAACG-TCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCTGATCA 144603 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || || || ||||| || |||| |||||| | |||||||| Sbjct 144604 GCAGCGTCTCATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGCACCTTGTCGGACTACAA 144663 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || ||| | || || ||| | |||| || Sbjct 144664 CATCCAGAAGGAGTCGACTCTTCATCTCGTACTCCGTCTCCGAGGTGG 144711 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| ||||||||| |||| || || || || Sbjct 144713 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTCGAAGTTGAATCCTCC 144772 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||||||||| || ||| | ||||| Sbjct 144773 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCA 144831 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||||| ||| || || || || || |||| |||||| | |||||||| Sbjct 144832 GCAACGACTCATTTTCGCAGGAAAGCAACTCGAGGACGGTCGCACCTTGTCGGACTACAA 144891 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || || || | || || ||| ||||||| ||| Sbjct 144892 CATTCAGAAAGAGTCCACTCTCCATCTGGTGCTCCGT 144928 >seq2 Length=781092 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || |||||| |||| || ||| | || Sbjct 629252 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCC 629311 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 629312 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCA 629370 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| || || ||||| || |||| || || ||| |||||||| Sbjct 629371 GCAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAGGACGGACGAACGCTCTCGGACTACAA 629430 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||| || || ||||| || ||| Sbjct 629431 CATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGT 629467 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| ||||| ||| |||| || ||| | | Sbjct 629480 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCG 629539 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || |||| ||||| || || |||||| | || || Sbjct 629540 GACACCATTGACAACG-TCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 629598 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 629599 GCAGCGCCTAATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCCGACTACAA 629658 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||||||| | || || || | || ||||| Sbjct 629659 CATTCAAAAGGAATCCACACTCCACCTTGTCTTGCGT 629695 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| | || |||||| | | Sbjct 629936 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACGATCACGTTGGAAGTCGAGTCTTCA 629995 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || ||||||| Sbjct 629996 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 630055 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || || || ||||| || || | || || || |||||||||| Sbjct 630056 CAGCGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGTCGTACACTGTCCGACTACAAC 630115 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || ||||| | || || ||| || | ||||| Sbjct 630116 ATCCAGAAGGAGAGC-ACTCTGCACCTCGTCCTCCGTCTGCGTGGCGG 630162 >seq1 Length=1046041 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || || || ||||||||| | || || ||| | |||||| | | | | | || | Sbjct 845631 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGGCC 845690 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || || | ||||| ||||| || ||| ||||||| ||||| || || | ||| || || Sbjct 845691 AAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGTAAG 845750 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| |||||||| |||||||||||||| ||||| |||| || || Sbjct 845751 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 845810 Query 38448 TTGGTGCTGCGT 38459 | || || ||| Sbjct 845811 CTTGTCCTCCGT 845822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500111572597120