Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq21 408 5e-109 seq4 167 3e-36 seq53 127 3e-24 seq5 89.7 7e-13 >seq21 Length=314282 Score = 408 bits (452), Expect = 5e-109 Identities = 785/1150 (68%), Gaps = 8/1150 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||||| | |||||||| ||||| | || ||||| ||||| || || |||||||| Sbjct 76905 TCACCCGAGAGAATGGCGGCCTGGACGGCGGCACCGTAGGCGACGGCTTCGTCGGGGTTG 76846 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || || || || ||||| || | || | | || | || | || ||| Sbjct 76845 ATCGACTTGTTGAGCTCGCGGCCGTTGAAGAAGTCGGTGAGCAGCTTCTGGACCTTGGGG 76786 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || || || ||||| ||| Sbjct 76785 ATACGGGTGGAACCACCGACGAGGACGATCTCGTGGACGGAGCCCTTGTCAATCTTGGAG 76726 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG-GAACAAGTCCATACACAGTTC 7248 || || || || |||||||| || || | | | || ||| | ||| || || || Sbjct 76725 TCGCGGAGGACCTTCTCGACAGGCTCGAT-CGTGTGCGAGAAGAGGTCACCGCAGAGCTC 76667 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| ||||| |||||||| || || || ||||| || | || ||| | | || || || Sbjct 76666 CTCGAAACGGGCACGGGTGATCGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCGAT 76607 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 || ||||| || || || | ||| || | ||| ||||| ||||||||||| || || || Sbjct 76606 CTCGATGGTGGTCTGGGCAGCCGACGAGAGCGTGCGCTTGGCGCGCTCACAGGCGGTGCG 76547 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | |||||| |||||||| | ||| || | || ||||| | || || || ||||| Sbjct 76546 GAGACGACGGAGGGCACGAGCGTTGGAGGTCAAGTCCTTCTTGTTCTTGCGCTTGAACTC 76487 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 | |||||| | ||| | || || || |||||||| | ||| || || || Sbjct 76486 CTGGACGAAGTGGTTGACGAGACGGTTGTCAAAGTCCTCACCACCAAGGTGGGTGTCACC 76427 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || |||||||| |||||||| | || ||| | || | ||| ||||| || || Sbjct 76426 GGCGGTGGCCTTGACTTCGAAGATACCCTCCTCGATGGTCAAGAGCGACACATCGAAGGT 76367 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 ||| ||||| || || || ||||| |||||| | ||| | || | ||||| |||||||| Sbjct 76366 ACCTCCACCAAGATCGAAGATGAGAACGTTCTTCTCGCCCTCGGTCTTCTTGTCGAGACC 76307 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| ||||| || || || || || || || || || || | ||| || || | || Sbjct 76306 GTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATGCGCATCACGTTGAGACCGGAGAT 76247 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | | || || || || || || || ||||| ||||| ||||| || ||||| || || Sbjct 76246 GATACCGGCGTCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTGAC 76187 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| |||||| |||| | ||||| || | || ||| | || ||| ||| || Sbjct 76186 GACAGCGTCCTTGACGGTGCCGCCGAGGTAGGCCTCTGCGGTCTCACGCATCTTGAGGAG 76127 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848 ||||| || ||||||||||| | | || ||| | ||||| || | || | | | Sbjct 76126 GACCATGGACGAAATCTCTTCGGGAGTGAAGGTCTTCTTCTCACCCTTGTACTCGA-TGC 76068 Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 | |||| | |||| || | | | | |||| | | ||| | ||||| ||| Sbjct 76067 GAATTTGGGGCTTGCCGC--CAACCGAGGTGACCTCGAAAGGCCAGTGCTTCATGTCGGA 76010 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 || |||| ||| ||||| | ||||| |||||||| || || || || ||||| Sbjct 76009 CTGCACCTCGGCGTCGTCGAACTTGCGGCCGATGAGACGCTTGGCGTCGAAGACGGTGTT 75950 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | |||||||| || |||||||| || || || || || ||||| || | | || Sbjct 75949 GTGTGGGTTCATAGCGACCTGGTTCTTGGCGGCATCACCAATGAGACGCTC-TGA--GTC 75893 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || ||||| || || ||||| || || || || |||||||| ||||| | || || Sbjct 75892 GGTGAAGGCGACATATGAGGGGGTGGTACGGTTACCCTGGTCGTTGGCAATGACCTCGAC 75833 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| |||||||||||| |||| || || || || || || | ||| |||||||| || Sbjct 75832 ACGGTCATTTTGCCAGACGGCGACACAGGAGTAGGTGGTGCCGAGATCGATACCGATGGC 75773 Query 8149 TTGAGTCATT 8158 | |||||| Sbjct 75772 CTTGGTCATT 75763 >seq4 Length=618039 Score = 167 bits (184), Expect = 3e-36 Identities = 458/694 (66%), Gaps = 22/694 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || || ||||||| ||| Sbjct 374998 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCAGCGGTGGCGAGCACCTCAAAGACACCC 375057 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||| ||||| || ||||| ||||| || || | | | | Sbjct 375058 GAGTCGATCGAGAGAAGCGAGACATCGAAGGTACCTCCACCGAGATCGTAGACAATGATC 375117 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| |||| || ||| ||||||||||| ||||| || || || || || || Sbjct 375118 TGCGACTCGCCGTCCTT---CTTGTCGAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCG 375174 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || || || ||| || || || || || | |||||||| || || ||||| Sbjct 375175 TTGACGATTCGGAGCACGTTGAGACCGGCGATGGTACCGGCATCTTTGGTGGCCTGTCGC 375234 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||| ||||| || || || |||| ||||| || | || || Sbjct 375235 TGAGCGTCGTTGAAGTAGGCGGGGACAGTGACAACGGCGTGGGTGACCTTGTGGCCAAGG 375294 Query 7757 TACGATTCCGCGATATCTTTCA--TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 || | || ||| | ||||||| |||||| || ||||| | ||||| ||| |||| | Sbjct 375295 TAAGCCTCGGCGGTCTCTTTCATCTTTTGG--AGCACCATGGCTGAAACCTCCTCAGGGG 375352 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 || ||| | || ||||| | | |||| ||| || || ||||| | Sbjct 375353 TGAAAACCTTCTTCTCGCCGTTGACAGTGACTTGAATGGCAGGCTT-TCCGC--CCTTCT 375409 Query 7875 GGATAACCTTATACGACCAAT-CTTTCATATCGTCTT--GGACCTGTTGGTCCGAAAACT 7931 || | ||| | | | ||| | |||| || || | | || ||| Sbjct 375410 CGACGAGCTTGAAGGGGAGGTGCTTGGCGTCCTTCTTGAGGTCCGACTCGCCC---CACT 375466 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | ||||| |||||||| || ||||| | ||||||| ||||||| ||| | |||| Sbjct 375467 TGCGACCGATGAGACGCTTGGCGTCAAAGATGGTGTTTTCGGGGTTCTGGGCGGCCTGGT 375526 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 |||| || ||||| |||| ||||| || | || || |||||||| || || | Sbjct 375527 TCTTGGCGGCGTCTCCGACGAGACGCTCGGGA------GTGAAGGCGACGTAGGAAGGAG 375580 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | | || || || |||||||| | || ||||| |||||| |||| | |||||| Sbjct 375581 TGATACGGTTACCCTGGTCGTTGGTGATGATTTCGACGCGGCCGTTGACCTGTGCGCCGA 375640 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | ||||| || || ||||| | ||| ||||| || Sbjct 375641 CACACGAGTAGGTGGTTCCAAGATCGATACCAAT 375674 >seq53 Length=118703 Score = 127 bits (140), Expect = 3e-24 Identities = 274/409 (67%), Gaps = 8/409 (2%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||| | | ||| || || || | | | | ||| || Sbjct 109871 TCCTCGAAACGGGCACGGGTGATGTTGGCCTGGAAGTCGACACCCTGGAAGAGCGAGTCG 109930 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 | || | ||| || || | ||| || | || ||||| || |||||||| |||| Sbjct 109931 ACCTCGACGGTGGTCTGGGTGACCGACGAGAGGGTGCGCTTGGCACGCTCACAAGCCGAA 109990 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | ||| || | ||||||||||| | || || || ||| | || || | ||| Sbjct 109991 CGCAGACGGCGGATGGCACGCGGGTCTTCAGAGATGTCGAGCTTGTTCTTGCGCTCGAAC 110050 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | |||||| |||||| ||||| || |||||||| | ||| || || Sbjct 110051 TCCTTCTTGAAGTGCTCAAGGAGGGCGTTGTCGAAGTCCTCACCACCAAGGTGGGTGTCA 110110 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || ||||| || ||||| | |||| ||| || ||||| | | ||||||||| || Sbjct 110111 CCAGCGGTGGCCTTGACGGCGAAGACACCGCCGGTGATGTTGAGGAGCGAAACATCGAAG 110170 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC----GTCGTCTTTGTTCTTATC 7602 || || ||||| || || | ||||| |||||| | || | || ||| | || Sbjct 110171 GTTCCTCCACCAAGATCGTAGATGAGGACGTTCTTCTCGGTGGACGACTTGG----AGTC 110226 Query 7603 GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||||||| ||||| || || || || || || || || ||||| ||| Sbjct 110227 GAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCGTTGATGATACGGAGA 110275 Score = 114 bits (126), Expect = 2e-20 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| || || || || || | ||||||||||||| | |||||||| Sbjct 111012 CCGATGAGACGCTTGGCGTCGAACACGGTCTGCCTGGGGTTCATGGCGGCCTGGTTCTTG 111071 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | || || || |||||||| || ||||| || Sbjct 111072 GCGGCATCACCGATGAGACGCTC---GCTCTCGGTGAAAGCGACGTAGGAGGGGGTGGTG 111128 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| || || || || || || ||||| ||| |||||||| Sbjct 111129 CGGTTACCCTGGTCGTTGGCGATGATCTCGACACGCTCGTTGACCCACCAACCGACGCAA 111188 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || | || |||||||| || Sbjct 111189 GAGTAGGTGGTACCAAGGTCGATACCGATGGC 111220 >seq5 Length=533949 Score = 89.7 bits (98), Expect = 7e-13 Identities = 203/303 (67%), Gaps = 8/303 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC- 7515 ||||| || |||||||| | ||| || || || ||||| |||||||| |||| || Sbjct 318524 TCGAAGTCCTCACCACCGAGGTGGGTGTCACCGTTGGTCGACTTGACTTCGAAGACGCCC 318465 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || || | | | | ||| | ||| || ||||| || |||| || || | | | Sbjct 318464 TTCTGCA-TCTCGAGAATCGAGATATCGAAGGTACCTCCTCCCAAATCGAAGACGGCAAT 318406 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || |||||| || |||||||||| |||| || || || || || || Sbjct 318405 GACCGACGAGTCGTCACGGT------CGAGACCGTAGGCGAGGGCGGCGGCAGTGGGCTC 318352 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || | ||| || || || ||||| || | | || || || || || || || Sbjct 318351 GTTGATGACACGGAGGACGTCGAGACCAGCGATGGCACCGGCGTCCTTGGTGGCCTGACG 318292 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| |||||||| ||||| || | ||| |||| | |||| |||| ||||| Sbjct 318291 CTGCGAGTCGTTGAAGTAGGCAGGGACGGTGATGACGGCGTGCTTGACGGTCTTGCCGAG 318232 Query 7756 ATA 7758 || Sbjct 318231 GTA 318229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635055051806120