Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq33 224 1e-53 seq62 158 2e-33 seq10 125 9e-24 >seq33 Length=192376 Score = 224 bits (248), Expect = 1e-53 Identities = 800/1232 (65%), Gaps = 29/1232 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| ||||| |||| ||||| || | || || || | Sbjct 134526 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGAATCCACGGCCAGGACATCGAGAGCGCC 134467 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || ||||| | ||| |||| |||||| | || |||||||| Sbjct 134466 ATCGAGACGTACAACCTCATGTCGCAAAAGTAC-TTCACCCACGCCTCGCCCACCCTCTT 134408 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||||||||| ||| || || | || || |||||| | | | ||||| || Sbjct 134407 CAACGCTGGTACCCCACACCCGCAGCTCTCGTCGTGCTTCCTTGTCACCATGAAGGACGA 134348 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || ||| | ||||| |||| ||| |||| |||||| ||||| ||| || || Sbjct 134347 CTCGATCGACGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 134288 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 ||||||||| | ||||||| || | | | | || ||| || || || Sbjct 134287 TGGTATCGGCCTCAACATCCACTGCATCCGCGGTACCGGATCCTACATTGCCGGCACCAA 134228 Query 111911 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 ||| |||| ||||||| | || ||||| ||||| || ||| ||| |||||||| Sbjct 134227 CGGTG--TCAGCAATGGTATCGTCCCCATGCTCCGCGTCTTCAACAACACTGCGCGCTAC 134170 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||| | | || | |||| |||| | ||||||||| Sbjct 134169 GTTGACCAGGGTGGCAACAAGCGCCCC---GGTGCCTTCGCCATCTACATCGAGCCATGG 134113 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||| |||| | | ||||||||||| | || ||||| || | || |||| ||| Sbjct 134112 CACTCGGACGTGTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGGTGCG- 134054 Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| || || ||||||| ||| |||||| | || ||||||||||||||||| || ||| | Sbjct 134053 TGCTCGTGAGCTCTTCTACGCGCTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCA 133994 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 || ||| | ||||| ||| | || || || || ||||||||| |||| | || Sbjct 133993 GAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGCTACGG 133934 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACGG 112260 || ||||| || ||||||| ||||||| || |||| | | ||| || | Sbjct 133933 CGACGAGTTCGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGTCGCTCCA-AGCGCACCG 133875 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | | || || || | | ||| | || || ||| |||| || || ||||| || | || Sbjct 133874 T-CAAGGCGCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACAGAGACCGGCAACCCC 133816 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | || || ||||| ||||| |||| |||||| || || ||||| | || ||| Sbjct 133815 TTCATCCTCTACAAGGACGCTGCCAACCGAAAGAGCAACCAGAAGAACCTCGGCACTATC 133756 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 ||| | |||||||| || || || ||| | || | | | || ||| || || Sbjct 133755 AAGTGCTCCAACCTGTGCACCGAGATCATCGAGTACAGCGCTCCCGACGAGGTCGCCGTC 133696 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 112499 || ||||| || || || || || |||| | | || || | || ||| | || Sbjct 133695 TGCAACCTTGCCTCCATTGCCCTTCCCACCTTCATCGACCCCGTCACCAAGGTCTACGAC 133636 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | | |||||| || | || | || || ||||| |||| | || || Sbjct 133635 TTCAAGCGCCTCCACAGTGTCGCCAAGGCCATCTGCAAGAACCTCAACAAGATCATCGAC 133576 Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 | || | |||||||| ||| || || | || || ||| | || || || || || Sbjct 133575 ATCAACTACTACCCCGTCGAGGAGGCCCGCAGGTCCAACATGCGCCATCGCCCTATCGGC 133516 Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTGATTCCG 112677 |||||||||| |||||||| || | ||||| || | | || |||| || || || Sbjct 133515 ATCGGTGTCCAGGGTCTCGCCGACGCCTTCATGATCATGG--GCTACGCCTTCGAATCGC 133458 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 ||| || |||| | || || || ||||| || || |||||||| || || | Sbjct 133457 CCGAGGCTCGCCGTCTCAACGTGCAGATCTTCGAGACCATCTACCACGCCGCCCTCGA-G 133399 Query 112738 CGA--GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 ||| || | ||| |||| ||| | || | || || |||| | || || || || Sbjct 133398 CGATCGTGC-GAGCTGGCCCAGGAGCACGGCACCTACGAGACCTACGCAGGCTCGCCCGC 133340 Query 112796 TTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827 || || || | ||| || | || ||||||| Sbjct 133339 CTCGCAGGGCGAGCTGCAGTACGACATGTGGG 133308 >seq62 Length=98030 Score = 158 bits (174), Expect = 2e-33 Identities = 131/160 (82%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| ||||| ||| |||| ||||| || ||||| ||||||||||||||||||| Sbjct 37306 CCTTTGCAGAGCGTCTCATCGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCCT 37247 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 37246 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 37187 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||||| ||||||||||| || ||| || ||||| Sbjct 37186 AGCTCATCTCGCGTGACGAGGGTCTTCACACCGACTTTGC 37147 >seq10 Length=380723 Score = 125 bits (138), Expect = 9e-24 Identities = 241/349 (69%), Gaps = 10/349 (3%) Strand=Plus/Minus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| |||||||| |||||||| ||||| |||| ||| ||| ||||||||||||| | Sbjct 327767 TTGATGATGAGACCTTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGATA 327708 Query 176783 CGACCATACCG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 176841 | || || || ||||| | ||||| |||| | ||| || || |||||||| | ||| Sbjct 327707 CTGCCGTAGCGCAAGCT-GTTGACATCGAGATACTGCTTGCCGTGCTGAAGACCAAGGAT 327649 Query 176842 CTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAAC 176901 || ||||| | |||| || || ||| ||| | ||||| || || || Sbjct 327648 CTCCTTGATGGCCTTGATTTCGGCATTCTTCATGATCTGATCGTGCGAGGCTTCTCGCAC 327589 Query 176902 ATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAG 176961 || ||| ||||| || ||||| |||||||| | || || || ||| | || Sbjct 327588 GTTGAGGAGCTTACCACGGAGCGGGAAAACACCGTAATTGTCTCGTCCGACCTCGACGAT 327529 Query 176962 ACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA--CTT- 177018 ||| || || ||||||| || || |||||||| || || | |||||| ||||| ||| Sbjct 327528 ACCAGCCACAGCGAGCGACTTGGCCGAATCACCTTCCGTGAGGATGAGCGTACAATCTTT 327469 Query 177019 -GCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAAT 177066 ||| | |||| ||| || ||||| ||||| || | ||||| || Sbjct 327468 GGCC--TTCCTGCC--ACCGGCGTTGTTGGCATCTTCGAGCTTGGGGAT 327424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620666413370960