Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq33 224 1e-53 seq39 132 6e-26 seq62 98.7 1e-15 seq10 91.5 2e-13 >seq33 Length=192376 Score = 224 bits (248), Expect = 1e-53 Identities = 1053/1652 (64%), Gaps = 55/1652 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||| | |||||| ||||| |||||| |||||| || || |||||||||||||| Sbjct 132895 GTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCAGCCATGTCGATGATGGC 132954 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 ||| ||||| || ||||||||||||||||||| |||||||| ||||| ||| | Sbjct 132955 CTTCTGGCTGATCTCCCAGACAGTCTTGTACAGCTTCTTGATGCGGTCGGGGATGCCGGG 133014 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGA-CCAGA 109678 | ||| || || || || || | ||| | | ||||||| | ||| ||| | Sbjct 133015 CACGTTCTGGATGGAACCGCCGTGGGCGATGATGCGGTTCTTCATCG-TGTCGTTCCACA 133073 Query 109679 GACCGACCTTTTTGAGATCGTCAA-CAAGATGCTTGTTGACCACGACAAATTCACCAGCA 109737 |||| || ||| ||| || ||| | ||||||||| |||||||| || Sbjct 133074 GACCCTGCTCGACGAGCTCGCGAAGCAACCAGGG-GTTGACCACCTGGAATTCACCGGCG 133132 Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797 || || || ||||||||| | |||||| || ||||| ||||| ||| ||| ||| Sbjct 133133 AGCACACGACGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGG 133192 Query 109798 ATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC---- 109853 || || || ||||| || |||||||| |||| || || ||| |||||||| Sbjct 133193 ATCTGACTGGTCGAAGCGGTAGGCATGGGCGCCAACAGCAGCGAGTTGCGGAGACCGTGC 133252 Query 109854 --------CTTCGTCTTTACCCGCTCA-CGCATTGCGTCCCAATCATAACGACCACTAAA 109904 ||| ||||| | ||||| | || |||||| || || Sbjct 133253 TTAGCGATCTTGGTCTTGA---GCTCAGCCCA----GTCCCA--CAGGTCGGA------- 133296 Query 109905 TTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTT 109964 || | | ||||||| || || || | |||| | || || || || Sbjct 133297 ---AGGCGTGACGCCCCACATGTCGTACTGCAGCTCGCCCTGCGAGGCGGGCGAGCCTGC 133353 Query 109965 GAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATG 110024 | | ||||||| | || | ||| ||||| |||| | || ||| || || || || Sbjct 133354 GTAGGTCTCGTAGGTGCCGTGCTCCTGGGCCAGCTCGCACGATCGCTCGAGGGCGGCGTG 133413 Query 110025 ATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG-GAA 110083 || || ||||| || || || | || | |||||| ||| | ||||||| | | Sbjct 133414 GTAGATGGTCTCGAAGATCTGCACGTTGAGACGGCGAGCCTCGGGCGATTCGAAGGCGTA 133473 Query 110084 GACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCT 110143 | ||| | | | || | || || |||||||| ||||||| || || |||||||| Sbjct 133474 GCCCATGATCA-TGAAGGCGTCGGCGAGACCCTGGACACCGATGCCGATAGGGCGATGGC 133532 Query 110144 TCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGA 110203 |||||| || | || || || |||||||| ||||| |||||||| | |||| Sbjct 133533 GCATGTTGGACCTGCGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTGA 133592 Query 110204 GATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCT 110263 | ||||| | | ||| | || ||||| | | | ||| | || || Sbjct 133593 GGTTCTTGCAGATGGCCTTGGCGACACTGTGGAGGCGCTTGAAGTCGTAGACCTTGGTGA 133652 Query 110264 CCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323 | | || | |||| || ||||| || ||||| ||||| || | |||||| Sbjct 133653 CGGGGTCGATGAAGGTGGGAAGGGCAATGGAGGCAAGGTTGCAGACGGCGACCTCGTCGG 133712 Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383 || |||| || | || || || |||| |||||| | ||| || || | ||||| Sbjct 133713 GAGCGCTGTACTCGATGATCTCGGTGCACAGGTTGGAGCACTTGATAGTGCCGAGGTTCT 133772 Query 110384 TCTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442 |||| || | ||| | | ||| || ||||| ||||| ||| | ||| | || || || Sbjct 133773 TCTGGTTGCTCTTTCGGTTGGCA-GCGTCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCT 133831 Query 110443 GTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCG-TTAGCGA 110500 ||||| |||| ||| ||||| | ||| | | || ||| | | || || ||| || | | Sbjct 133832 GTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGCGCCTTG-ACGGT-GCGCTTGGAGC 133889 Query 110501 GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAA 110560 |||| || ||||||| ||| | | ||| || || | ||||| || | | Sbjct 133890 GACCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCGAACTCGTCGCCGTAGCAGTCGGCGA 133949 Query 110561 GACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCA 110620 |||| || || ||| || | ||| ||||| | || || ||| |||||||||| Sbjct 133950 GACCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCA 134009 Query 110621 TGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCAC 110680 |||| || || || | ||| | ||| |||| || ||||| ||| ||||||| | | Sbjct 134010 TGAAGAGATCGGGCACCCAGAGCGCGTAGAAGAGCTCACGAGCACGCACCTCTTCCTTTC 134069 Query 110681 CTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGA 110740 | ||||| ||| || || | || || | | |||||||||||||| |||| |||| Sbjct 134070 CGTGGTTCTTGCGGAGGTCAAGGAACTCGAACACGTCCGAGTGCCATGGCTCGATGTAGA 134129 Query 110741 CAGCGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCAT 110794 |||| || || ||| | | || |||||| ||| ||||| || ||| | Sbjct 134130 TGGCGAAGGCACCGGGGCGCTT--GTTG-CCACCCTGGTCAACGTAGCGCGCAGTGTTGT 134186 Query 110795 TGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGG 110854 ||||||| | |||||| || | || |||| | ||| || || || ||| || Sbjct 134187 TGAAGACGCGGAGCATGGGGACGATACCATTGCTGACACCGTTGGTGCCGGCAATGTAGG 134246 Query 110855 ACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTT 110914 | | | || ||| |||||| | | || |||||||| || ||| || Sbjct 134247 ATCCGGTACCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCA 134306 Query 110915 GTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATT 110973 |||||| ||| |||| || | || || || || ||||| || |||| ||| | Sbjct 134307 TGGCACACGTCT-TGAGCGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACA 134365 Query 110974 AGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCA 111033 || ||||| || || | ||| || | || || || || |||||||| || || | || Sbjct 134366 AGGAAGCACGACGAGAGCTGCGGGTGTGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCG 134425 Query 111034 TGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTA 111093 || |||| ||| ||||| |||||| || |||| ||| | || | Sbjct 134426 TGGGTGAAGTACTTTTGCGACATGAGGTTGTACGTCTCGATGGCGCTCTCGATGTCCTGG 134485 Query 111094 CCGTGAATACCAATGGCAACTCGCATGAACAT 111125 ||||| || || | ||| || ||||||| ||| Sbjct 134486 CCGTGGATTCCGACGGCGACACGCATGAGCAT 134517 >seq39 Length=164988 Score = 132 bits (146), Expect = 6e-26 Identities = 322/477 (68%), Gaps = 17/477 (4%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||| || || || | || ||| | || || | ||| ||||| ||| | Sbjct 66926 CGATCGAAACGGCCAGGACGCATGAGCGCAGCGTCGAGCACGTCGGGCCGGTTGGTACCA 66867 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | || || | | ||| || ||||||||||||| | ||| | || |||| Sbjct 66866 GCGAGCACGACGACGTGCTCCTCTGTGCCGAAACCGTCCATCTGGACGAGCAACTCGTTG 66807 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCA---TACCACC--TGCCGAACGCTTCTTAC 11677 | |||| || |||||||||||| | | ||||| |||| ||| |||||| Sbjct 66806 AGCGTCGACTCGCGCTCATCGTTGCCACCAAAGTTGCCACCCTTGCC--ACGACTCTTAC 66749 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT--C 11735 ||| ||||| |||||||||||||| | ||| ||||| | || | || | ||| | Sbjct 66748 CGATGGCGTCGATCTCATCGATGAAGATGATGCACGG-AGCGTGCTTCTTGGC-GTTGGC 66691 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | || || || || | | || ||||| || |||||||| || || || | | Sbjct 66690 GAACATGTCTCGGACTCGGCTGGGACCGACACCGACAAACATCTCGAC-AAATTCGGAAC 66632 Query 11796 AGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 | | || || | |||||| || || || || ||| |||| || || || |||| Sbjct 66631 CGGAAACGGAGAGGAAGGGTACGGCAGCTTCGCCGGCGGTGGCCTTGGCCAGCAGCGTCT 66572 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912 |||| ||||| || | |||| ||| | ||| || || |||||||| ||||| |||| Sbjct 66571 TACCGGTACCGGGGGGGCCAGAGAGGATGGCACCGCGCGGGATCTTTGCACCGAGCTTC- 66513 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 ||| || |||||||||||||||| |||| |||| | ||||||||||| Sbjct 66512 -TCGTACTTTTCGGGCTTCTTGAGGAAGTTGACAAACTCCATGATCTCCTCCTTGGC 66457 >seq62 Length=98030 Score = 98.7 bits (108), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || || || || ||||||||||| || |||| || || Sbjct 37146 GGCAAAGTCGGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 37205 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| ||||||| || ||||| |||||||| Sbjct 37206 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGAT 37265 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670 |||||| || || || |||| |||||||| || |||||| | | |||||| || Sbjct 37266 GCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGC-AAAGGTGGCGCGCTTGTCGCTGA 37324 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||| |||||||||| |||||| ||| | | ||||| || | || ||| || | Sbjct 37325 TCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 37384 Query 119731 AAAG 119734 | || Sbjct 37385 AGAG 37388 >seq10 Length=380723 Score = 91.5 bits (100), Expect = 2e-13 Identities = 231/347 (67%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 168241 TTGAGAATGAGACCCTTGATATGGCTTCCATCATTATCTGCGTCTGTCATGATCATGAGA 168300 |||| |||||||| ||||| || ||||| | ||| || ||||||||||||| | Sbjct 327767 TTGATGATGAGACCTTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGATA 327708 Query 168301 CGACCATAACG-AAGTTCGGAAACATCTTTGTACTCCTTTCCTTGTTGAAGTCCCAAAAT 168359 | || || || ||| | | ||||| |||| ||| || || ||||| || | || Sbjct 327707 CTGCCGTAGCGCAAGCT-GTTGACATCGAGATACTGCTTGCCGTGCTGAAGACCAAGGAT 327649 Query 168360 TTTCTTGAGATCATTGAACTCCTGATTAGATGTCAACTGTGCCACCGATGAGTCCCTCAC 168419 | ||||| | |||| || ||| | | ||| | ||| | || | ||| Sbjct 327648 CTCCTTGATGGCCTTGATTTCGGCATTCTTCATGATCTGATCGTGCGAGGCTTCTCGCAC 327589 Query 168420 GTTTTTACACTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAG 168479 ||| |||||||||||| || || || || |||| |||| || || || || Sbjct 327588 GTTGAGGAGCTTACCACGGAGCGGGAAAACACCGTAATTGTCTCGTCCGACCTCGACGAT 327529 Query 168480 ACCAGCGACAGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCC 168539 |||||| |||||||| | || || |||||||| || || | |||||| ||||| | | Sbjct 327528 ACCAGCCACAGCGAGCGACTTGGCCGAATCACCTTCCGTGAGGATGAGCGTACAATCTTT 327469 Query 168540 AGACT--GTGCCGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGAT 168584 | || |||| ||| || ||||| ||||| || | |||||||| Sbjct 327468 GGCCTTCCTGCC--ACCGGCGTTGTTGGCATCTTCGAGCTTGGGGAT 327424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588903901975400