Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2 174 3e-38 seq11 159 8e-34 seq1 136 9e-27 >seq2 Length=781092 Score = 174 bits (192), Expect = 3e-38 Identities = 168/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 || ||| ||||||||||| ||| ||| |||||||| ||||||||| || || | || Sbjct 629923 TCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTCAGGGTGCGACC 629864 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| |||||||||||||| || ||||| ||||| || ||||| ||||| || ||||| || Sbjct 629863 ATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGGATACCTTCCTT 629804 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||| || ||||| ||||||||| ||||| ||||||||| || ||||| | ||| | Sbjct 629803 GTCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCCAAGGTGAT 629744 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||||||| | || || ||||| | ||||| Sbjct 629743 GGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| |||||||| || ||||| || |||||||| ||||| |||| ||| || | Sbjct 629698 GAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGGGTGCG 629639 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || |||||||||||||| || |||||||| || || || || || || ||||||||||| Sbjct 629638 GCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGAATGCCTTC 629579 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || |||||||| |||||||||||||| || || || ||||| Sbjct 629578 CTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGT 629519 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || ||||| || || || || | ||||| Sbjct 629518 AATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||| || | || |||| || || |||||||| Sbjct 629455 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGTCCGTCCTCGAGCTG 629396 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || || || || ||||| ||||| ||||| || ||||| || || || Sbjct 629395 CTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 629336 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||||||||| ||| ||||| || ||||| | ||||| || || Sbjct 629335 GGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGT 629276 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || ||||| | ||||| Sbjct 629275 CAGAGTCTTGACGAAGATCTGCAT 629252 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||| ||| || || || ||||| |||| || || | ||||| ||| Sbjct 630144 ACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGTGTACGACCATCCTCG 630085 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| ||||| || ||||| || || || || || ||||| || Sbjct 630084 AGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGG 630025 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || ||||| ||| || ||||| | || | |||||| Sbjct 630024 ATCTTGGCCTTGACATTGTCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGTCTTG 629965 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 629964 CCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 >seq11 Length=377427 Score = 159 bits (176), Expect = 8e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAGTTCTCCCATCTTC 194990 || || || |||||||||||||| ||||| ||||| | || |||| || | || || || Sbjct 144921 ACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGACAAG-GTGCGACCGTCCTC 144863 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| ||||| |||||||| || |||||||| ||||| || || ||||| |||||||| || Sbjct 144862 GAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 144803 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || |||||||| || ||| ||||| ||||| | ||||| Sbjct 144802 GATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCGAGGGTGATGGTCTT 144743 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| || || ||||| | ||||| Sbjct 144742 GCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || | ||| || | || || ||| Sbjct 224492 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 224551 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || || || || ||||||||||| ||||| || Sbjct 224552 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGG 224611 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| ||||| || ||||| | || || Sbjct 224612 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGATGGTTTTG 224671 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 224672 CCCGTGAGGGTCTTGACAAAGATCTGCAT 224700 Score = 123 bits (136), Expect = 6e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 || || |||||||| ||||| || || || ||||| || | |||| || | || ||||| Sbjct 144693 ACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAG-GTGCGGCCGTCTTC 144635 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || ||||| || || || || || || ||||||||||| ||||| || Sbjct 144634 AAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTG 144575 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| ||||| ||||| || || || || ||||| | ||||| Sbjct 144574 AATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTT 144515 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | ||||| Sbjct 144514 GCCGGTGAGAGTCTTGACAAAGATCTGCAT 144485 >seq1 Length=1046041 Score = 136 bits (150), Expect = 9e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || ||||| || | ||| || | || || ||| Sbjct 845815 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 845756 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || || || || ||||| ||| Sbjct 845755 AGCTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGA 845696 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| ||| ||||| |||||||| | ||||| Sbjct 845695 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTA 845636 Query 195112 CCTGT 195116 ||||| Sbjct 845635 CCTGT 845631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109342390223231