Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq33 434 2e-116 seq62 302 8e-77 seq9 91.5 3e-13 seq7965 84.2 4e-11 >seq33 Length=192376 Score = 434 bits (480), Expect = 2e-116 Identities = 1261/1917 (66%), Gaps = 92/1917 (5%) Strand=Plus/Plus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATG 212636 |||| |||||| || || |||||| |||||||||| || ||||| |||||||| | | Sbjct 132791 GCAGGCTTGGTACGCAGGTAGTACGTGCCGGTCTTGAGACCCTTCTTCCAGCCGTAAAAG 132850 Query 212637 TGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAG- 212695 ||||| | ||||| || | | | | | | | ||| ||| || | Sbjct 132851 TGCATCGAGGTGAG---------CTGA-----CCG---AACGTGGGCGCCGAGAGGTGGA 132893 Query 212696 -GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATAT 212754 ||| || ||||| |||| ||||| | | | ||| || |||||||| ||||| Sbjct 132894 TGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCAGCCATGTCGATGATGG 132953 Query 212755 CTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGG 212814 | ||||| || |||||| || |||||| | | | |||| | || |||| ||||| Sbjct 132954 CCTTCTGGCTGATCTCCCAGACAGTCTTGTACAGCTTCTTGATGCGGTCGGGGATGCCGG 133013 Query 212815 GGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG--CATGTCCTCGTTCCA 212872 | | |||||| | || || | ||| | | | ||| | ||| |||||||| Sbjct 133014 GCACGTTCTGGATGGAACCGCCGTGGGCGATGA--TGCGGTTCTTCATCGTGTCGTTCCA 133071 Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGA-----CCAGGTGAGGGTTGACTATCTGGAAGTCA 212927 || ||| || || | || | || ||||| ||||||| | |||||| ||| Sbjct 133072 CAGACCC-TGCTCGACGAGCTCGCGAAGCAACCAGG----GGTTGACCACCTGGAATTCA 133126 Query 212928 CCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTC 212987 || | |||||| | | | ||| | ||| || ||||| ||||||| || ||||||| Sbjct 133127 CCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGAAG 133186 Query 212988 CCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACT 213047 || || ||||| || || || |||||||| |||| ||| || ||| | | Sbjct 133187 CCGAGGATCTGACTGGTCGAAGCGGTAGGCATGGGCGCCAACAGCAGCGAGTTGCGGAGA 133246 Query 213048 CCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCG 213107 ||||||| |||| | | ||||| ||||||||||| | | || ||| Sbjct 133247 CCGTGCTTAGCGATCTTGGTCTTGAGCTCAGCCCAGTCCCACAGGTCGGA-AGG------ 133299 Query 213108 TCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTG-GTA 213166 | | ||| ||||||||| |||||| ||| | || |||| |||| ||| Sbjct 133300 --CGTGACGCCCCACATGTCGTACTGCAGCTCGCCCT-GCGAGGCGGGCGAGCCTGCGTA 133356 Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 | ||||| ||| ||||||| |||||||||||| || || ||||| |||| ||| Sbjct 133357 GGTCTCGTAGGTGCCGTGCTCCTGGGCCAGCTCGCACGATCGCTCGAGGGCGGCGTGGTA 133416 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGG------ 213280 |||||| || || |||| | |||||| ||||| || || ||||| Sbjct 133417 GATGGTCTCGAAGATCTGCACGTTGAGACGGCGAGCCTCGGGCGATTCGAAGGCGTAGCC 133476 Query 213281 CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTG 213340 ||| |||||| || | || || || |||||||| ||||||||||| || | || Sbjct 133477 CATGATCATG------AAGGCGTCGGCGAGACCCTGGACACCGATGCCGATAGGGCGATG 133530 Query 213341 TCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTT 213400 | || ||| ||| || | |||||| | |||||| ||||| ||||||||||||||| Sbjct 133531 GCGCATGTTGGACCTGCGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTT 133590 Query 213401 GAGGTT---GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTA 213457 |||||| || | ||||| |||| |||| | ||| || | | | | || | Sbjct 133591 GAGGTTCTTGCAGATGGCC---TTGGCGACACTGTGGAGGCGCTTGAAGTCGTAGACCTT 133647 Query 213458 GCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC 213517 | || | | || || ||||| ||| ||| |||||||| ||||| ||||| Sbjct 133648 GGTGACGGGGTCGATGAAGGTGGGAAGGGCAATGGAGGCAAGGTTGCAGACGGCGACCTC 133707 Query 213518 CT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCA 213576 | | ||| | ||||||| ||||||||||||||||||||| ||| ||| ||||| | Sbjct 133708 GTCGGGAG-CGCTGTACTCGATGATCTCGGTGCACAGGTTGGAGCACTTGATAGTGCCGA 133766 Query 213577 GGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGG 213636 |||||| ||||| |||| |||||||| ||||||||||| ||| ||||| |||| Sbjct 133767 GGTTCTTCTGGTTGCTCTTTCGGTTGGCAGCGTCCTTGTAGAGGATGAAGGGGTTGCCGG 133826 Query 213637 TCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGA 213696 ||||| ||| ||| | || || | |||||| | | |||||||| ||| || Sbjct 133827 TCTCTGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGCGCCTTGACGGTGCGCTTG- 133885 Query 213697 CAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCC 213756 ||| | || |||||||| | |||||||| | ||| |||| ||| || Sbjct 133886 GAGCGACCCTCG--GCCTCGTAGCGCTCGTAGAGGCGCTCGAACTCGTCGCCGTAGCAGT 133943 Query 213757 TGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACT 213815 | | || || || || ||| |||||||| |||||| ||| || ||| ||| Sbjct 133944 CGGCGAGACCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTC-GACC 134002 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 |||| |||||| || || || ||||| |||||| ||| || || | | | | ||| Sbjct 134003 CTCTTCATGAAGAGATCGGGCACCCAGAGCGCGTAGAAGAGCTCACGAGCACGCACCTCT 134062 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| ||| ||| ||||| || || || || || || | ||||| |||||| ||||| Sbjct 134063 TCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAACACGTCCGAGTGCCATGGCTCG 134122 Query 213936 ATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACC 213992 ||||||||||| ||||| || | || | ||||| |||||||| || | || Sbjct 134123 ATGTAGATGGCGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGCGCAGTG 134182 Query 213993 ATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG--GACTGTCCGTTGGTTCCCGCTA 214050 ||||||||| ||| || | ||| || | || ||| ||| |||||||| || || | Sbjct 134183 TTGTTGAAGACGCGGAGCATGGGGACGATACCATTGCTGAC--ACCGTTGGTGCCGGCAA 134240 Query 214051 TATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGG 214110 | || || |||| | | | | | ||| ||| || || ||||||||| ||||| Sbjct 134241 TGTAGGATCCGGTACCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGG 134300 Query 214111 AGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGT 214170 |||||||||| || | | | || || ||||||| | || ||| || | | | Sbjct 134301 AGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGG 134360 Query 214171 TCAGCAAGAAGCAGCTCGAGAGCTG-GGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGG 214229 | | | |||||| ||||||||| ||| ||| | |||| |||||| || ||||| Sbjct 134361 TGACAAGGAAGCACGACGAGAGCTGCGGGTGTGG-GGTACCAGCGTTGAAGAGGGTGGGC 134419 Query 214230 CTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATG 214289 ||| ||| | | |||| | || | ||| |||| ||||| | | | |||| Sbjct 134420 GAGGCGTGGGTGAAGTACTTTTGCGACATGAGGTTGTACGTCTCGATGGCGCTCTCGATG 134479 Query 214290 TCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGT 214349 || || |||||| | ||| | ||| |||||||||||||| | ||| || | Sbjct 134480 TCCTGGCCGTGGATTCCGACGGCGACACGCATGAGCATGTGCTGGGGACGCTC--TGCGA 134537 Query 214350 CCTTTGGGGCCCTT------GAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAG 214403 |||| ||| || ||| |||||||| ||||| || |||||||| || ||| || Sbjct 134538 CCTT----GCCGTTGATGCGGAGGAGGTAGGAACGCTCGAGGGTCTTGAAGCCGAAGAAG 134593 Query 214404 GAGTAG-GTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGCTC 214459 |||| | | | ||| | ||| |||| ||| | ||| |||| ||| |||||| Sbjct 134594 TTGTAGTGGAAG-TCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCTC 134649 >seq62 Length=98030 Score = 302 bits (334), Expect = 8e-77 Identities = 571/830 (69%), Gaps = 24/830 (3%) Strand=Plus/Plus Query 47858 TTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTG 47917 ||||| |||||||| ||||| || | ||| |||||||||||| ||| ||||||||| Sbjct 36874 TTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTTCTCCATAAAGTCGAAGGGGTTT 36933 Query 47918 GGTGTGTTATAC--ACCCGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACT 47975 | || | || | | | || ||| | | ||| ||| | || || ||||||| Sbjct 36934 GTTGCGCCGTAGTGAACAGGGTT--GCCGAGCGAGACCAAAAGGCGGTCTGCAACGTACT 36991 Query 47976 CGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTG 48035 ||||||||| |||||| | | ||||||||| || | | || ||||| || | || Sbjct 36992 CGATGTATTGACGCATGAGCGCGGCGTTCATGCCGATCAAGCTGACAGGCAATGCGTCTG 37051 Query 48036 TGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT-GCTTAACGCG--GGACT 48092 |||| || ||||||| |||| ||||| || | | |||| | | || | || | Sbjct 37052 TGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGATGATCTTGAGCACCGTGTCGGGGT 37111 Query 48093 CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGC 48152 || | | || ||| ||||| || |||| | |||||||||||| |||| | | Sbjct 37112 GTGCGCGCTTCTTG---AGGTGGCTGA---AGAGGAGGCAGGCAAAGTCGGTGTGAAGAC 37165 Query 48153 CTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTT 48212 | ||||| || ||||||| ||||||||||| |||||| ||||||| || | || | Sbjct 37166 CCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCT 37225 Query 48213 TGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACG 48272 |||||||||| || | ||||| || |||||||||||||||||||| || || || || | Sbjct 37226 TGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATGCCCTCGACGGCAGCAAAGG 37285 Query 48273 CGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTG 48332 || |||| | |||| | || | ||| |||||| |||||| ||| |||||||| | Sbjct 37286 CGATGAGACGCTCTGCAAAGGTGGCGCGCTTGTCGCTGATCCATCGAAGAGCCCAGTCGG 37345 Query 48333 CCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTG 48392 |||||| ||||| | || || ||||| | ||| ||||| | || || ||| Sbjct 37346 CCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAATTCGCGCTGCTCTG 37405 Query 48393 CGTCCGC-AACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCT 48448 || ||| | ||||| |||| ||| | ||| | || ||||| | ||||| Sbjct 37406 -GTTCGCGGATGTAGGTGTCGATGAGGAGC---GAGTAGGTTTCCGAGTGGATGTTCTCC 37461 Query 48449 ATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAAT 48508 || ||||||||| ||||||||| | |||||| |||| ||||| | | |||| Sbjct 37462 ATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGCGGCCTGAACTTCCGAGCTGAAT 37521 Query 48509 CTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGT 48568 | ||| | || ||||| ||||| || || || ||||| || |||||||| || || || Sbjct 37522 CGCTCGACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCGAAGAAGGCGAGAACGTGG 37581 Query 48569 TTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCC 48625 | ||| ||||||||||||| | |||| || |||| | || | ||| ||| Sbjct 37582 GAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGGTCCTTGGAA 37641 Query 48626 AGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 ||||| | || || | ||||||||||| || || || |||||||| Sbjct 37642 AGGTCGATCTCCTCTGCGGTCCAGAAGGAAGCCTCGGCCTTCTTGTACAT 37691 >seq9 Length=398039 Score = 91.5 bits (100), Expect = 3e-13 Identities = 135/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 38894 ACCGGAGAATGCGTACCTGTCCAACACCAGGCTCGTCCCCCGT-TCCAGC-TTCTGCTTC 38951 ||| ||||| ||||| | || | || | |||| || |||| || ||| ||||| || Sbjct 185174 ACCCGAGAAAGCGTAACGATCGCAGACGATGCTC-TCGCCCGCATCGAGCGTTCTG-TTG 185231 Query 38952 ATCAGGGGCACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCC 39011 ||| || || |||||||| |||||| ||||||||||| |||| || |||||||| Sbjct 185232 ATCGAGGCGACGCACTCCCACCGGTTGGCAGAGAAGAGCAGATGGATCGCCTGGTCGTCG 185291 Query 39012 AGCTCCGTCTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTCG 39071 ||||| | | | ||||| ||| ||||||||| ||||||| |||||||| || Sbjct 185292 AGCTCGCTGGTCTGGGCGAGGTAGGAGTTGATCATCTGACCGATGGCTGTGGTTCTTTCT 185351 Query 39072 GGGAAC 39077 || ||| Sbjct 185352 GGAAAC 185357 >seq7965 Length=216 Score = 84.2 bits (92), Expect = 4e-11 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 213212 CAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGA 213271 ||| || |||| ||||||||| ||||| |||| | ||| || | ||||| | || Sbjct 214 CAGTGCGGCGTGGTAGATGGTCTCAAAGATCTGCACGTTCAGTCGCCGAGCCTCGGCCGA 155 Query 213272 CGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGA 213330 | | || |||| | |||| |||| |||| || || ||||| || ||||| |||| Sbjct 154 C-TCAAACGCATACCCCATGATCATGAACGCATCCGCAAGGCCCTGAACACCGATCCCGA 96 Query 213331 TGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCG 213389 | || | ||| | || ||| |||||| | || |||||| | || || |||| |||| Sbjct 95 TCGGACGGTGACGCATGTTGGACTTGCGCGC-CTCCTCGACCGGATAGTAGTTAATGTCG 37 Query 213390 ATGATCTTGTTGAGGTT 213406 ||||||||||| ||||| Sbjct 36 ATGATCTTGTTCAGGTT 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931418768741120