Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq33 324 3e-83 seq62 242 7e-59 seq7965 86.0 1e-11 >seq33 Length=192376 Score = 324 bits (358), Expect = 3e-83 Identities = 874/1320 (66%), Gaps = 33/1320 (3%) Strand=Plus/Plus Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCAGCGT 221429 |||| | |||||||| |||| | | |||| | |||| || || ||||| |||| Sbjct 133353 CGTAGGTCTCGTAGGTGCCGTGCTCCTGGGCCAGCTCGCACGATCGCTCGAGGGCGGCGT 133412 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 ||||||||||||| |||||| | |||||| | |||||||| || ||||| | Sbjct 133413 GGTAGATGGTCTCGAAGATCTGCACGTTGAGACGGCGAGCCTCGGGCGATTCGAAGG-CG 133471 Query 221490 TA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548 || | || ||| ||| ||||||| || ||||| || ||||| ||||| || | || Sbjct 133472 TAGCCCATGATCATGAAGGCGTCGGCGAGACCCTGGACACCGATGCCGATAGGGCGATGG 133531 Query 221549 CTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606 | | ||||||| |||| | || || | ||||| || |||||| |||||| | |||| Sbjct 133532 CGCATGTTGGACCTGCGGGC-CTCCTCG-ACGGGGTAGTAGTTGATGTCGATGATCTTGT 133589 Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666 |||||||| |||| | || | || | || | | ||||| | Sbjct 133590 TGAGGTTCTTGCAGATGGCCTTGGCGACACTGTGGAG------GCGCTTGAAG------T 133637 Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726 || | | | | || ||| || | || | | ||||||| | ||| ||||| || | Sbjct 133638 CGTAGACCTTGGTGACGGGGTCGATGAAGGTGGGAAGGGCAATGGAGGCAAGGTTGCAGA 133697 Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786 |||| |||||||| | | |||| |||||||| || || |||||| |||||||| Sbjct 133698 CGGCGACCTCGTCGGGAGCGCTGTACTCGATGATCTCGGTGCACAGGTTGGAGCACTTGA 133757 Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846 | || || |||| || || || ||| || |||||||||||||||||||| || |||| Sbjct 133758 TAGTGCCGAGGTTCTTCTGGTTGCTCTTTCGGTTGGCAGCGTCCTTGTAGAGGATGAAGG 133817 Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACC 221905 | ||| ||||| ||| | | | || || || |||||| | |||| || | || Sbjct 133818 GGTTGCCGGTCTCTGTCTGCGACTCGAGGATGGCGTACCAGAGCT-TCTGCGCCTTGACG 133876 Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965 || | |||| |||||||| | || || | ||||| || |||| || Sbjct 133877 GTGCGCTTGGAGCGACCCTCGGCC---TCGTAGCGCTCGTAGAGGCGCTCGAACTCGTCG 133933 Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTG 222025 ||||| ||| | || || || ||| | ||| ||||| || ||||| ||| Sbjct 133934 CCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTC 133993 Query 222026 TCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTC 222085 | | |||||||| ||||||||| || || | ||| ||||| | ||||| || | | Sbjct 133994 TGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGCGCGTAGAAGAGCTCACGAGCA 134053 Query 222086 CGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGC 222145 ||| ||| ||| |||| ||| || | || || | ||||| || | ||| | |||| Sbjct 134054 CGCACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAACACGTCCGAGTGC 134113 Query 222146 CACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATC 222205 || ||||| | |||| ||| | || ||||| ||||||||||||||||| || || Sbjct 134114 CATGGCTCGATGTAGATGGCGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAG 134173 Query 222206 CTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGT 222264 | | ||| | |||||||| ||| || | || || | || ||| ||||||||| Sbjct 134174 CGC-GCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCATTGCTGACACCGTTGGT 134232 Query 222265 GCCCTTAATGTACGCACCGCCGGCCCTCAGGT-TACTGGCAG-ACATGCCGATACCACCG 222322 ||| |||||| | ||| | || | | | | ||| | | ||||||||||||| Sbjct 134233 GCCGGCAATGTAGGATCCG--GTACCGCGGATGCAGTGGATGTTGAGGCCGATACCACCG 134290 Query 222323 GCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCC 222382 ||| || ||||||||||| || ||||||| ||||| |||||| || || ||||| Sbjct 134291 GCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCGTCGATCGAGTCG 134350 Query 222383 TCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAAC 222442 ||||| | | | | || || || ||||| | ||| | | | || || ||||| || Sbjct 134351 TCCTTCATGGTGACAAGGAAGCACGACGAGAGCTGCGGGTGTGGGGTACCAGCGTTGAAG 134410 Query 222443 AGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACT 222502 || ||||| |||||| || ||||| ||||| || | ||||||||| | | | Sbjct 134411 AGGGTGGGCGAGGCGTGGGTGAAGTACTTTTGCGACATGAGGTTGTACGTCTCGATGGCG 134470 Query 222503 CTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTC 222562 || |||||| | ||||| || | |||| | |||| ||||| |||||| | | Sbjct 134471 CTCTCGATGTCCTGGCCGTGGATTCCGACGGCGACACGCATGAGCATGTGCTGGGGACGC 134530 Query 222563 TCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620 || | |||| | | | || ||| ||||| || || || |||||||| || | Sbjct 134531 TCTGC--GACCTTGCCGTTGATGCGGAGGAGGTAGGAACGCTCGAGGGTCTTGAAGCCGA 134588 Query 222621 AGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCT 222680 || ||||| || ||||| | ||| | | ||| | ||| |||| |||||||| Sbjct 134589 AGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCT 134648 >seq62 Length=98030 Score = 242 bits (268), Expect = 7e-59 Identities = 565/855 (66%), Gaps = 26/855 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || ||||||||| || ||||| || || Sbjct 37700 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTT 37641 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 |||||||| | ||| |||| || |||| | | | |||||| || || || Sbjct 37640 TCCAAGGACCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAGCGCCACTTCATCT 37583 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 |||| | || ||||| || || || || || || || |||||||| || |||| Sbjct 37582 CCCACGTTCTCGCCTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTCGAGC 37523 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 |||||| | |||||| ||| || |||||| || |||||||| |||||||| | Sbjct 37522 GATTCAGCTCGGAAGTTCAGGCCGCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGA 37463 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA-- 25766 | || || | ||||| || || | ||| || || || ||||| || Sbjct 37462 TGGAGAACATCCACTCGGAAACCTACTC---GCTCCTCATCGACACCTACATCCGCGAAC 37406 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | || | | || || || |||| ||| ||||| ||| ||| | ||||| ||| Sbjct 37405 CAGAGCAGCGCGAATTC--CTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAA 37348 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 ||| ||||| | ||||||| | | || |||| || |||| ||||| || | Sbjct 37347 GGCCGACTGGGCTCTTCGATGGATCAGCGACAAGCGCGCCACCTTTGCAGAGCGTCTCAT 37288 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 ||||||||||| || ||||||||||| ||| ||||| || || ||||||||||||| Sbjct 37287 CGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCTGGCT 37228 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || || ||||||||| || ||| ||||||||||||||| | ||||| Sbjct 37227 CAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGA 37168 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 |||||| |||| || ||||||||||| |||| || ||||| ||| | || | | Sbjct 37167 GGGTCTTCACACCGACTTTGCCTGCCTCCTCTTCA---GCCAC---CTCAAGAAGCGCGC 37114 Query 26067 TCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCN 26123 || || || || || ||||||| ||||| || ||||||||||||| || | Sbjct 37113 ACACCCCGACACGGTGCTCAAGATCATCAGCGAGGCCGTCGAGATCGAGAAGGCCTTCCT 37054 Query 26124 NNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACAT 26183 | ||||||||| | |||||| | |||||||| Sbjct 37053 CACAGACGCATTGCCTGTCAGCTTGATCGGCATGAACGCCGCGCTCATGCGTCAATACAT 36994 Query 26184 TGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC 26243 ||||| || || |||| || || | ||| || | | | |||| | | | Sbjct 36993 CGAGTACGTTGCAGACCGCCTTTTGGTCTCGCTCGGCAACCCTGTTCACTACGGCGCAAC 36934 Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303 ||||| |||||||||||||| ||||| ||| |||| |||||||||||||| || || Sbjct 36933 AAACCCCTTCGACTTTATGGAGAACATCAGCTTGCAAGGCAAGACCAACTTCTTCGAGAA 36874 Query 26304 GAGGGTCGGCGACTA 26318 || ||||| ||| || Sbjct 36873 GAAGGTCGCCGAGTA 36859 >seq7965 Length=216 Score = 86.0 bits (94), Expect = 1e-11 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478 ||| || |||||||||||||||||||||||| | ||| |||| | ||||||| | Sbjct 214 CAGTGCGGCGTGGTAGATGGTCTCAAAGATCTGCACGTTCAGTCGCCGAGCCTCGGCCG- 156 Query 221479 AGTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 | | || ||||| | || ||| |||| | | || || || ||||| || ||||| ||| Sbjct 155 ACTCAAACGCATACCCCATGATCATGAACG-CATCCGCAAGGCCCTGAACACCGATCCCG 97 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 || || | ||| | | ||||||| | ||| || || ||||| |||| | |||| Sbjct 96 ATCGGACGGTGACGCATGTTGGACTTGCGCGCCTCCTCGACCGGATAGTAGTTAATGTCG 37 Query 221597 ATCAGATTGTTGAGGTTC 221614 || | ||||| |||||| Sbjct 36 ATGATCTTGTTCAGGTTC 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928731097785920