Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11 105 4e-17 >seq11 Length=377427 Score = 105 bits (116), Expect = 4e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||||||||| |||||||| || || || | || || || | | || Sbjct 144705 CGGAGACGGAGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTG 144646 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | |||||||| |||||||| ||||| || ||||| || |||||||| ||||| ||| Sbjct 144645 CGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGGGAATGCCT 144586 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 |||||||| |||||||| ||||| |||||||| || | | || ||| Sbjct 144585 TCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGG 144526 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||||||||| || || || || Sbjct 144525 GTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTG 144488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267759130714364