Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq62 114 4e-20 seq21 109 2e-18 >seq62 Length=98030 Score = 114 bits (126), Expect = 4e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133452 AGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTC 133511 |||| | ||||||||| || ||||||| |||||||| || | ||||| |||| Sbjct 37351 AGAAGGCCGACTGGGCTCTTCGATGGATCAGCGACAAGCGCGCCACCTTTGCAGAGCGTC 37292 Query 133512 TCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTT 133571 || | || ||||||| || |||||||| || ||| |||| | ||| ||| || || | Sbjct 37291 TCATCGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCT 37232 Query 133572 GGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGG 133631 |||| || ||||||||| | | || || || || || ||||| || || || | | Sbjct 37231 GGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGTG 37172 Query 133632 ACGAGGCACTTCACACCGAATTTGCC 133657 |||||| ||||||||||| |||||| Sbjct 37171 ACGAGGGTCTTCACACCGACTTTGCC 37146 >seq21 Length=314282 Score = 109 bits (120), Expect = 2e-18 Identities = 239/356 (67%), Gaps = 4/356 (1%) Strand=Plus/Minus Query 302490 GTCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGT 302549 ||| || ||||| |||||||| | | | || |||| ||||| | |||| || || Sbjct 292748 GTCGATACCGTCTTCGCCGTACGCAAATTGGATGACGTTGTTGGTCGAGTTTCGCACCGT 292689 Query 302550 CATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACC 302609 || || | | ||||| ||| || | ||||| ||||||||||| || || || Sbjct 292688 GCCGTCGTAGCACACCATAACGTCCTCGAGTGCCTTGACCAAACGACGCTGGATGTAGCC 292629 Query 302610 AGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAA 302669 || | || || || || ||||| || ||||| | ||||| |||| || ||||| Sbjct 292628 CGTCTCTGCCGTCTTGACGGCGGTATCGATGAGACCCTCTCGACCTGCCATGGCGTGGAA 292569 Query 302670 GAATAGCTCTTC--CGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCC 302727 ||| | ||| | |||| || || | | | ||||| |||| || || ||||| | Sbjct 292568 GAAAAACTCCTGTGCGGTG--AGACCACGCAGATAGGAGTTCTCGACAAAGCCACGACTC 292511 Query 302728 TCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGG 302787 ||||| | |||| |||||||||||| ||||| | | || ||||| |||| Sbjct 292510 TCGGGAGTGAAGTCGTCCTTGGTAAAGTGAGGCAGACTGCGGTGGCGGAAGCCGAATGGA 292451 Query 302788 ATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||||||||||| || ||| ||| || || | ||| | ||||||||| || || Sbjct 292450 ATACGCTTTCCTTCTACGGACTGTTGACCGACGCAGGCTGACATCTGCGAGATGTT 292395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471632926906241