Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq33 233 2e-56 seq2 120 3e-22 seq11 113 4e-20 >seq33 Length=192376 Score = 233 bits (258), Expect = 2e-56 Identities = 995/1531 (65%), Gaps = 62/1531 (4%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| ||||||||||| | || ||||| ||| |||||| ||| | ||||| || Sbjct 133115 ACCTGGAATTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTACGGCTCGAAG 133174 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||| || || |||||| || | ||||| |||||| ||||| || || Sbjct 133175 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAAGCGGTAGGCATGGGCGCCAACAGCAGC 133234 Query 138628 GAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685 || || || | |||||| ||| || || ||||||| | ||||||||||| | Sbjct 133235 GAGTTGCGGAGACCGTGCTTAGCGATCTTGGT--CTTGAGCTCAGCCCAGTCCCACAGGT 133292 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745 || ||| | | |||||| |||||||| | | ||| ||||| |||| Sbjct 133293 CGGAAGGCGTGACGCCCCACATGTCGTACTGCAGCTCGCCCTGCGAGGCGGGCGAGCCTG 133352 Query 138746 CGTACGAATCGTATACACCAAACTCTTGCGCCAACTCG-TTGCTCGCCTCGAGCGCACCA 138804 |||| | ||||| || ||| || |||| |||| | ||| |||||| || | Sbjct 133353 CGTAGGTCTCGTAGGTGCCGTGCTCCTGGGCCAGCTCGCACGATCG-CTCGAGGGCGGCG 133411 Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC-GGCGCTCTCGTACGG 138863 | ||| || || ||| |||||| ||||| || ||||| |||| | ||| | || Sbjct 133412 TGGTAGATGGTCTCGAAGATCTGCACGTTGAGACGGCGAGCCTCGGGCGAT-TCG-AAGG 133469 Query 138864 CAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGAT 138922 | | || | ||| |||| |||||||| || || || || || | |||| |||||||| Sbjct 133470 CGTAGCCCATGATCATGAAGGCGTCGGCGAGACCCTGGACACCGATGCCGATAGGGCGAT 133529 Query 138923 GGCGCAGATTTGACGCTTTTGCGG----CTTCGATAGGATAATAGTTTACATCGATGATT 138978 |||||| || ||| ||||| | |||| || || ||||| | |||||||| Sbjct 133530 GGCGCATGTTGGAC----CTGCGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATC 133585 Query 138979 TTGTTTAAATT-TCGCACGACCACCTTAGTCGTATGCTTT--AATCGTTCAAAATCGTAT 139035 ||||| | || | ||| || |||| | || | || | | || | || ||||| Sbjct 133586 TTGTTGAGGTTCTTGCA-GATGGCCTT-GGCG-ACACTGTGGAGGCGCTTGAAGTCGTA- 133641 Query 139036 GTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTG 139095 | || ||| || |||| ||||| || || | ||| ||||| | |||| Sbjct 133642 --GACC---TTG--GT-GACGGGGTCGATGAAGGTGGGAAGGGCAATGGAGGCAAGGTTG 133693 Query 139096 CACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACAC 139155 || || || || |||||||| ||||||| |||| || |||| |||| || ||| Sbjct 133694 CAGACGGCGACCTCGTCGGGAGCGCTGTACTCGATGATCTCGGTGCACAGGTTGGAGCAC 133753 Query 139156 TTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATA 139215 ||||| || || | || | || ||||| |||||||| ||| || ||||| || || Sbjct 133754 TTGATAGTGCCGAGGTTCTTCTGGTTGCTCTTTCGGTTGGCAGCGTCCTTGTAGAGGATG 133813 Query 139216 TACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG-CTTG 139274 | || |||| || || || | ||| | ||| | | | | | | |||| Sbjct 133814 AAGGGGTTGCCGGTCTCTGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGCGCCTTG 133873 Query 139275 TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTT 139333 || ||| | | | | ||| |||||| |||||||| ||||| ||| | Sbjct 133874 ACGGTG-CGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCGAACTCG-T 133931 Query 139334 CACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGT 139393 | |||||| ||| | ||| || | |||| || || |||||||||||||| |||||| Sbjct 133932 CGCCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGT 133991 Query 139394 TCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCG 139453 || || ||| | | ||||||| ||||| || | ||| | ||| | | | || || | Sbjct 133992 TCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGCGCGTAGAAGAGCTCACGAG 134051 Query 139454 CCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGC 139511 | | |||||| || ||| || | | || |||||| || || ||||| | Sbjct 134052 CACGCACCTCTTCCTTTCCGTGGTT--CTTGCGGAGGTCAAGGAACTCGAACACGTCCGA 134109 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGAC 139568 ||||||||| || | |||||||| | || || || |||||||| || || || Sbjct 134110 GTGCCATGGCTCGATGTAGATGGCGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCAAC 134169 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTG-TTCCGT 139627 || || ||| || ||||| ||||| | ||| || | | ||| | |||| |||| Sbjct 134170 GTAGCGCGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACC-ATTGCTGACACCGT 134228 Query 139628 TGGTGCTACGG--ATG--GGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGAT 139682 |||||| ||| ||| ||| | | | | | |||| | || | |||| |||||| Sbjct 134229 TGGTGC--CGGCAATGTAGGATCCGGT---ACCGCGGATGCAGTGGATGTTGAGGCCGAT 134283 Query 139683 TCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATACCTCTTA 139741 || ||| | ||||| || | | || || | | || ||||| || || | Sbjct 134284 ACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTG-AGCGTGTCGTAGATGCCGTCGA 134342 Query 139742 TGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGG 139801 | |||||||| ||| ||||| || ||||| ||||| || ||||| || || || | Sbjct 134343 TCGAGTCGTCCTTCATGGTGACAAGGAAGCACGACGAGAGCTGCGGGTGTGGGGTACCAG 134402 Query 139802 CTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTT 139861 | || || || || ||||| ||||| | || |||||| | | |||||| | Sbjct 134403 CGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGTACTTTTGCGACATGAGGTTGTACGTCT 134462 Query 139862 CGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTT 139921 ||||||||||| | || ||| |||||||| ||||| | ||| ||||| ||||| || | Sbjct 134463 CGATGGCGCTCTCGATGTCCTGGCCGTGGATTCCGACGGCGACACGCATGAGCATGTGCT 134522 Query 139922 GGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTT 139979 || || || || ||| ||| | ||| || || | || ||| |||||||| Sbjct 134523 GGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAACG--CTCGAGGGTCTT 134580 Query 139980 GTAGCCAAAGTACCTATAGTTGAAATCGAGC 140010 | |||| ||| | | |||| ||| ||| || Sbjct 134581 GAAGCCGAAGAAGTTGTAGTGGAAGTCGCGC 134611 >seq2 Length=781092 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||||| || || || || || || | ||||| || | | Sbjct 629708 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACCATCACCTTGGAAGTCGAGTCTTCG 629767 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||| ||||| ||||| || |||||||| || Sbjct 629768 GACACGATTGACAACGTCAAGGCCAAA-ATCCAGGACAAGGAAGGTATCCCTCCCGACCA 629826 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | |||||||| || || ||||| |||||| | | | || ||||| || Sbjct 629827 GCAGCGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGAGCGATTACAA 629886 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || ||| | |||||||||||||||||||| Sbjct 629887 CATTCAAAAGGAGAGCACCCTTCACCTTGTGTTGCGATTGCGCGGAGG 629934 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || || ||||| ||||| || || | | Sbjct 629480 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCG 629539 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||| ||||| || || || ||||| Sbjct 629540 GACACCATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 629599 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| || || | | | | || || || ||| Sbjct 629600 CAGCGCCTAATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCCGACTACAAC 629659 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||||||||| ||||| ||| | || ||||| Sbjct 629660 ATTCAAAAGGAATCCACACTCCACCTTGTCTTGCG 629694 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || ||||| || ||||| || || | || Sbjct 629252 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCC 629311 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 629312 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 629371 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || ||||| || ||||| ||||| ||| | || || || ||| Sbjct 629372 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAGGACGGACGAACGCTCTCGGACTACAAC 629431 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || |||||||| Sbjct 629432 ATCCAGAAGGAGTCGACCCTCCACTTGGT 629460 >seq11 Length=377427 Score = 113 bits (124), Expect = 4e-20 Identities = 167/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 24697 TGATAC--GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA 24754 |||||| ||||||||||||| | || || || || || ||||| || || ||||| || Sbjct 224709 TGATACAAGATGCAGATCTTTGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTG 224650 Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 || || | ||||| | || | || || |||||||| ||||| ||||| || || Sbjct 224649 GAGTCCTCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCC 224590 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 || ||||| || || | ||||| ||||| || ||||| ||||| | | | | || Sbjct 224589 CCTGATCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTTTCG 224530 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || ||||| ||||| || ||| | ||| | || |||| || || Sbjct 224529 GACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTTCGCCTGCGTGGTGG 224474 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || ||||| || || || || ||||| || || || | Sbjct 144484 GATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 144543 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||| || ||||| ||||| || || || ||||| Sbjct 144544 CGACACTATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCTGATCA 144603 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||||||||| || ||||| || || | | | |||| || || || Sbjct 144604 GCAGCGTCTCATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGCACCTTGTCGGACTACAA 144663 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||| ||||| || || Sbjct 144664 CATCCAGAAGGAGTCGACTCTTCA 144687 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || |||||||| ||| || || Sbjct 144713 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTCGAAGTTGAATCCTCC 144772 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||| || || || || || || Sbjct 144773 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 144832 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | || || || || || || || ||||| | | | |||| || || ||| Sbjct 144833 CAACGACTCATTTTCGCAGGAAAGCAACTCGAGGACGGTCGCACCTTGTCGGACTACAAC 144892 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || || || ||||| | || | || ||||| Sbjct 144893 ATTCAGAAAGAGTCCACTCTCCATCTGGTGCTCCGTCTCCGTGGAGG 144939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449842526910040