Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 >seq2 Length=781092 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || || ||||| || | |||| || || ||||| ||||||||||||||| Sbjct 629934 CCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTC 629875 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| || ||||| || ||||||||| |||| || || ||||| |||||||| Sbjct 629874 AGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGG 629815 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||||| || | | || | |||||| | | || ||| Sbjct 629814 ATACCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 629755 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | ||||| || || | || || ||||| || |||||| Sbjct 629754 TCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCATA 629707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | |||||| || | || | ||| ||||| ||||| |||||||| ||| Sbjct 629706 CCACCACGGAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAA 629647 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||||||||| || || || || |||| || || |||||||| || || Sbjct 629646 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGA 629587 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||| ||||| || || ||| | | || | ||||| | | || || Sbjct 629586 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAACC 629527 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | |||||||||||||| || || || || || |||||| Sbjct 629526 TCGAGGGTAATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCATA 629479 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 137221 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 137280 || || || |||||||| ||| || ||| | || ||||| || ||||||||| || Sbjct 630126 TCCTTCTGGATGTTGTAGTCGGACAGTGTACGACCATCCTCGAGCTGCTTACCAGCAAAG 630067 Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340 || || || ||||| ||||| || || || || ||||| || || || | | Sbjct 630066 ATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 630007 Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400 || | |||||||| | || ||||| | || | |||||||||||| | ||| || ||| Sbjct 630006 TCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGTCTTGCCGGTGAGTGTCTTGACG 629947 Query 137401 AATATTTGCATAGCT 137415 || || |||||| || Sbjct 629946 AAAATCTGCATACCT 629932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488484196107600