Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq62 273 3e-67 seq33 170 3e-36 seq7 123 4e-22 seq6 118 2e-20 >seq62 Length=98030 Score = 273 bits (302), Expect = 3e-67 Identities = 400/553 (72%), Gaps = 12/553 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| ||||| |||||||| |||||| |||||| Sbjct 37701 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACC 37643 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | ||| | |||||| ||| | |||| |||||||||| |||||| Sbjct 37642 TTTCCAAGGACCTCCACGACTGGGACAACAAGCTCAACGACAACGAGCGCCACTTCATCT 37583 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| |||||||| || |||||| ||| |||||||| ||||||||| | || Sbjct 37582 CCCACGTTCTCGCCTTCTT-CGCCGCTTCCGACGGCATCGTCAACGAGAACCTCGTCGAG 37524 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | || || || | ||||| |||| || ||||| ||||||||| Sbjct 37523 CGATTCAGCTCGGAAGTTCAGGCCGCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATG 37464 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| ||||||||||||||||| |||||||||||| || || || Sbjct 37463 ATGGAGAACATCCACTCGGAAACCTACTCGCTCCTCATCGACACCTACATCCGCGAACCA 37404 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT-GCCGTCGGTGAGGAAAAAGGC 1456130 | || || ||||||| |||| |||| || | ||||| || | | | ||||| Sbjct 37403 GAGCAGCGCGAATTCCTCTTTGACGCCGTCGAGACCATCCCCGTC-GTCAAGCAGAAGGC 37345 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190 ||||||||| | ||||||| | | || | | | || |||||| ||||| ||| || Sbjct 37344 CGACTGGGCTCTTCGATGGATCAGCGACAAGCG-CGCCAC-CTTTGCAGAGCGTCTCATC 37287 Query 1456191 GGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249 | |||||| | ||||||||||||||| ||||| || ||| | ||||||| |||||| Sbjct 37286 GCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCTGGCTC 37227 Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||||||| || ||||||||||||| || ||| |||||| | ||| || ||||| Sbjct 37226 AAGAAGCGTGGTCTCATGCCCGGTC-TCACCTTCTCCAACGAGCTCATCTCGCGTGACGA 37168 Query 1456310 -AGTTTTCACCCC 1456321 || ||||| || Sbjct 37167 GGGTCTTCACACC 37155 Score = 91.5 bits (100), Expect = 2e-12 Identities = 220/321 (69%), Gaps = 18/321 (6%) Strand=Plus/Minus Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGACC--GAC---GTG 1456513 ||||||||||| || |||| || | | |||| |||| || ||| ||| ||| Sbjct 37154 GACTTTGCCTGCCTCCTCTTCAGC---CACCTCAAGAAGCGCGCACACCCCGACACGGTG 37098 Query 1456514 CCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTG 1456573 | |||| |||||| ||||||||||||||||||||| | || ||| || | || Sbjct 37097 CTCAAG---ATCATCAGCGAGGCCGTCGAGATCGAGAAGGCCTTCCTCACAGACGCATTG 37041 Query 1456574 CCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCG 1456633 || || | ||||||||||||||| |||||||| | || ||||| | | | || | Sbjct 37040 CCTGTCAGCTTGATCGGCATGAACGCC-GCGCTCATGCGTCAATACATCG-AGTACGTTG 36983 Query 1456634 CCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTC 1456693 | |||||||| | | |||||||| | | |||||| | | | ||||| ||| Sbjct 36982 CAGACCGCCTTTTGGTCTCGCTCGGCAACCCTG-TTCACTACGGCGCAACAAACCCCTTC 36924 Query 1456694 CCATGGATGGAGTTGATCTCGCTCG-AGGGCAAGACCAACTTTTTCGAG-CGCCGCGTGG 1456751 | |||||| ||| ||| | | |||||||||||||| |||||| | | | Sbjct 36923 GACTTTATGGAGAACATC-AGCTTGCAAGGCAAGACCAACTTCTTCGAGAAGAAGGTCGC 36865 Query 1456752 CGAGTACGCCAAGGCCGGCGT 1456772 ||||||||| ||| ||||||| Sbjct 36864 CGAGTACGCAAAGACCGGCGT 36844 >seq33 Length=192376 Score = 170 bits (188), Expect = 3e-36 Identities = 278/395 (70%), Gaps = 19/395 (5%) Strand=Plus/Minus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849 |||| ||||| |||||| | |||||||||||||||||| | || || || | Sbjct 134538 GTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGA-ATCCACGGCCAG-- 134482 Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG 259909 ||| |||| | || | ||| |||| | |||| ||||||||| ||| Sbjct 134481 GACATCGAGAGCGCCATCGAG-ACGTACA----ACCT-------CATGTCGCAAAAGTAC 134434 Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 |||||| || ||||||| ||||| || || || || || | ||||||| |||||| Sbjct 134433 TTCACCCACGCCTCGCCCACCCTCTTCAACGCTGGTACCCCACACCCGCAGCTCTCGTCG 134374 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || | |||||||| ||| |||||||| |||||||| |||||||||||| | Sbjct 134373 TGCTTCCTTGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACGCTCAAGACG 134314 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 || || | ||||||||| | ||||| || ||||| | | ||| | |||| Sbjct 134313 TGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGT 134254 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACG--GCCAGTCCAACGGCCTTGTGCCCATGCTTC 260147 | || ||||| | || |||||||||| | ||| ||| || | || |||||||| | Sbjct 134253 ACCGGATCCTACATTGCCGGCACCAACGGTGTCAG--CAATGGTATCGTCCCCATGCTCC 134196 Query 260148 GCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 |||| || ||| |||| ||||||||||| |||||| Sbjct 134195 GCGTCTTCAACAACACTGCGCGCTACGTTGACCAG 134161 Score = 114 bits (126), Expect = 2e-19 Identities = 298/452 (66%), Gaps = 20/452 (4%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| ||||||| || ||||| ||| |||| | || || |||||| | ||| | Sbjct 134160 GGTGGCAACAAGCGCCCCGGTGCCTTCGCCATCTACATCGAGCCATGGCACTCGGACGTG 134101 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || |||||| ||||||||||| |||| || || | | || || Sbjct 134100 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGGT------GCGTGCTCGT 134047 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGT-GACCGG--C 261964 || ||||| |||| || ||| | ||| || || ||| | ||| || | | | Sbjct 134046 GAGCTCTTCTACGCGCTCTGGGTGCCCGATCTCTTCATGAAGAG---GGTCGAGCAGAAC 133990 Query 261965 CGCGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCG 262024 |||||||||||||| | ||||| |||| ||||| || ||| ||||| |||| Sbjct 133989 GGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGCTACGGCGAC 133930 Query 262025 GCCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNC---GCGGACCGTCGTG 262081 | || || |||||| ||| | ||| |||||| | Sbjct 133929 GAGTTCGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCAAG 133870 Query 262082 CCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTAC 262141 | ||| || || |||||| ||||| ||| | | || | |||||||||| |||| | Sbjct 133869 GC-GCA-GA-AGCTCTGGTACGCCATCCTCGAGTCGCAGACAGAGACCGGCAACCCCTTC 133813 Query 262142 ATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACA 262201 || ||||||||||||| | ||||| | ||||||||| ||||||| ||||| | | | Sbjct 133812 ATCCTCTACAAGGACGCTGCCAACCGAAAGAGCAACCAGAAGAACCTCGGCACTATCA-A 133754 Query 262202 GAG-GCCAACCTGTGCACCGAGATCGTCCAGT 262232 | | |||||||||||||||||||| || ||| Sbjct 133753 GTGCTCCAACCTGTGCACCGAGATCATCGAGT 133722 >seq7 Length=477565 Score = 123 bits (136), Expect = 4e-22 Identities = 306/462 (66%), Gaps = 2/462 (0%) Strand=Plus/Plus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTG-TTGCAGGC 332934 ||||||||||| || || || | || ||||||| | ||| | || |||||||| Sbjct 68723 CGCAGGATGGCGCAGCGTGATTGAATGGGTTCGATGATC-TTGTTGCTCTGGTTGCAGGC 68781 Query 332935 CAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGC 332994 | | ||||| || || |||| | | ||||||||| | | ||||| || || Sbjct 68782 GAAGCAAAACCTGGTGGTGTTGGAGTAGATCTCCATGGTCCTTCTCAACGCCTGCTGAGC 68841 Query 332995 CGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 || ||||| | || |||||||||||||||||||||||||||||| | ||| | || || Sbjct 68842 AGCGGGCGTCATGCTGTCGGCCTCGTCGAGGATGATGATCTTGTGTCTTCCGGGTGGGAG 68901 Query 333055 ATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTC 333114 ||| ||||| || ||||| | ||||| || ||||| || || || || Sbjct 68902 CGAGACCTTTTTCTGTGCAAACGTCTTGATCTTGTTGCGAACCACGTCGACACCTCGTTC 68961 Query 333115 GTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGC 333174 ||| || ||||||||||||||||| | || | | ||| | || | || | || || Sbjct 68962 GTCGGATGCGTTGAGTTCGAGCACACCTTCCTTGTAGGCATCGCCGAGAAGCGCACGTGC 69021 Query 333175 CAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGG 333234 || || | | ||||||||||| | || || |||||| | | |||| || Sbjct 69022 GAGACAGAGAACGGAGGTGGTCTTGCCGATACCAGGAAGACCCGAGATGAGCAGGTGCGG 69081 Query 333235 CATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAAT 333294 ||||||||| | ||||||| | | || || | ||||||||| | Sbjct 69082 ACAGTTGCCGTCCTTCTGAATGACCTTGAGCCGATCGATGGTGTCTTTGTTGCCGACCAC 69141 Query 333295 GTCGTCGAGCACCATTGGGCGGTACTTTTCGATCCATGGGAG 333336 |||||||| || || ||||||||||| | ||| || || Sbjct 69142 ATCGTCGAGTCGCAGCGGACGGTACTTTTCTACCCACGGTAG 69183 >seq6 Length=523417 Score = 118 bits (130), Expect = 2e-20 Identities = 176/248 (71%), Gaps = 14/248 (6%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||| ||| |||||| |||||||||||||| |||||| || | | ||| Sbjct 199432 TACTCGACCTACATCTACCGTGTGCTCAAGCAGGTTCACCCCGACACTGGT-----ATC- 199485 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| ||||| | || | |||||||| ||| | ||||| |||| ||||||| | Sbjct 199486 TCGAACAAGGCCATGGCCATTCTCAACTCGTTCGTCCAGGACATCTTCGAGCGCATCGCC 199545 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCC----AACAAGCGCAACACGATCGGCACGCGCGA 725074 ||||||||| || || |||| | |||||| || ||| |||| || Sbjct 199546 ACCGAGGCCT----CCAAGCTCGCTTCGTACAACAAGAAGTCGACCATCTCGTCGCGAGA 199601 Query 725075 GATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGA 725134 |||||||||||| || ||||| ||| | | ||| || || ||| ||||||| |||| || Sbjct 199602 GATCCAGACCGCTGTCCGCCTCATCCTCCCCGGTGAGCTTTCCAAGCACGCCATCTCGGA 199661 Query 725135 GGGCACCA 725142 || |||| Sbjct 199662 AGGTACCA 199669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176866647150466