Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 167 2e-36 seq11 134 1e-26 seq33 127 2e-24 seq1 111 2e-19 >seq2 Length=781092 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || ||||| || ||||||||||||||||||||||||||| | Sbjct 629706 CCACCACGGAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAA 629647 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| ||||| || || || | ||||||||||| || || Sbjct 629646 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGA 629587 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || |||||| ||| | ||||| ||||| || || Sbjct 629586 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAACC 629527 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| |||||||| || ||||| || || || || || || ||||| Sbjct 629526 TCGAGGGTAATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | | ||||||||| ||||| || ||| ||||||||||||||||| |||| Sbjct 629934 CCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTC 629875 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || |||||||| || || ||||| || | |||||||| ||||| || Sbjct 629874 AGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGG 629815 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || ||||| ||||| ||| | ||||| || || || || Sbjct 629814 ATACCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACT 629755 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | || || |||||||| ||||| Sbjct 629754 TCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || || ||||| || ||||||||||| Sbjct 629478 CCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 629419 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| || || || ||||| | ||||||||| || || || Sbjct 629418 AGCGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGG 629359 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 629358 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 629299 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| | ||| || ||||| || ||||| Sbjct 629298 TCGAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 629252 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGT--GAGAGTCGT 134562 |||||||| || ||| ||||| || |||||||||||| || |||| || || | Sbjct 630144 ACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG--GACAGTGTACGACCATCCT 630087 Query 134563 CGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTT 134622 ||||||| || || ||||| || | |||||||| ||||| || || || || || || | Sbjct 630086 CGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCT 630027 Query 134623 GAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTT 134682 | || || ||||| ||| | ||||| || || || || || | || || || | Sbjct 630026 GGATCTTGGCCTTGACATTGTCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGTCT 629967 Query 134683 TACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| | || || |||||||| ||||| Sbjct 629966 TGCCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 >seq11 Length=377427 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || |||| ||| || | ||||| || || || || ||||| || ||||||||||| | | Sbjct 144711 CCACCTCGGAGACGGAGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAC 144652 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| | ||| || ||||| || || ||||| || | |||||||||||| || || Sbjct 144651 AA-GGTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGGG 144593 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || || ||||| || ||||| ||| | |||||||| || || || Sbjct 144592 AATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGAC 144533 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | ||| || || || || ||||| Sbjct 144532 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 144485 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545 ||||| | ||| || | ||| || || || ||||| || || ||||||||||||| || | Sbjct 144939 CCTCCACGGAGACGGAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGAC 144880 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| || ||| ||||| || || ||||| ||||| | || ||||| || || || Sbjct 144879 AA-GGTGCGACCGTCCTCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGG 144821 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| ||||| || || || || ||||| ||| | |||||||| ||||| || Sbjct 144820 GATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAAC 144761 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || || || || ||||| || ||||| Sbjct 144760 TTCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 Score = 127 bits (140), Expect = 2e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || || || ||||| || ||||||||||| || |||| | Sbjct 224483 AGGCGAAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 224542 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| || || || || || | ||||||||||| || || |||||||| Sbjct 224543 CCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGGAATGCCTTCC 224602 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| || || ||||| ||||| || Sbjct 224603 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTG 224662 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 |||||||| || || | || || || || || ||||| |||| Sbjct 224663 ATGGTTTTGCCCGTGAGGGTCTTGACAAAGATCTGCATCTTGT 224705 >seq33 Length=192376 Score = 127 bits (140), Expect = 2e-24 Identities = 559/875 (64%), Gaps = 15/875 (2%) Strand=Plus/Minus Query 7537 ATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATT 7596 ||||||||| | ||| || || || |||||||| |||| || || || || || Sbjct 134550 ATCAACGGCAAGGTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGAATC 134491 Query 7597 CACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTT 7656 |||||| | ||||| || |||| | || |||||| | | ||||| || | || Sbjct 134490 CACGGCCAGGACATCGAGAGCGCCATCGAGACGTACAACCTCATGTCGCAAAAGTACTTC 134431 Query 7657 ACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAA-ACGCGCCTCAATTGTCCTCGTG 7715 || ||||| ||||||||| | || ||| || || || | || || | || ||||| Sbjct 134430 ACCCACGCCTCGCCCACCCTCTTCAACGCTGGTACCCCACAC-CCGCAGCTCTCGTCGTG 134372 Query 7716 TTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TT 7774 || | | |||||| || ||| ||||||||||| ||| ||||||| | || | Sbjct 134371 CTTCCTTGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACGCT-CAAGACGT 134313 Query 7775 GCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCA 7834 | |||| || ||||| || ||| || || || || ||| | || | | |||| | Sbjct 134312 GTGCCATGATCTCCAAGACCGCCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGTA 134253 Query 7835 ACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGC---GGTTTAGAGCCCATGTTGC 7891 ||| | ||| | ||||||||| | |||| ||| | | |||||| | | Sbjct 134252 CCGGATCCTACATTGCCGGCACCAACGG---TGTCAGCAATGGTATCGTCCCCATGCTCC 134196 Query 7892 GCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCG 7948 |||| ||||| ||| | | ||| | || |||||||| || |||||| || ||| Sbjct 134195 GCGTCTTCAACAACACTGCGCGCTACGTTGACCAGGGTGGCAACAAGCGCCCCGGTGCCT 134136 Query 7949 CTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCA 8008 |||||||| | ||||| |||||| ||||| | | || | || | || || | Sbjct 134135 TCGCCATCTACATCGAGCCATGGCACTCGGACGTGTTCGAGTTCCTTGACCTCCGCAAGA 134076 Query 8009 ACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATC 8068 || || ||||| || || || || |||| || | ||||||||||||| Sbjct 134075 ACCACGGAAAGGAAGAGGTGCGTGCTCGTGAGCTCTTCTACGCGCTCTGGGTGCCCGATC 134016 Query 8069 TGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCC 8128 | || |||| | | || | ||| | |||||||||||||||||| | |||| Sbjct 134015 TCTTCATGAAGAGGGTCGAGCAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCC 133956 Query 8129 CTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACG 8188 | | || ||||| | || || | | ||| | | ||||| || Sbjct 133955 CCGGTCTCGCCGACTGCTACGGCGACGAGTTCGAGCGCCTCTACGAGCGCTACGAGGCCG 133896 Query 8189 ACGG-CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGT 8247 | || ||| | | ||| || || |||| | || |||||| |||| | Sbjct 133895 AGGGTCGC-TCCAAGCGCACCGTCAAGGCGCAGAAGCTCTGGTACGCCATCCTCGAGTCG 133837 Query 8248 CAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAAT 8307 || | || ||||| | || | ||| || ||||| |||||| |||| || ||||| Sbjct 133836 CAGACAGAGACCGGCAACCCCTTCATCCTCTACAAGGACGCTGCCAACCGAAAGAGCAAC 133777 Query 8308 CAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGC 8367 || | ||| | ||||| || ||| ||| |||||| | || || | |||||||| Sbjct 133776 CAGAAGAACCTCGGCACTATCAAGTGCTCCAACCTGTGCACCGAGATCATCGAGTACAGC 133717 Query 8368 GCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 || |||||||| || ||||| ||||| || || || Sbjct 133716 GCTCCCGACGAGGTCGCCGTCTGCAACCTTGCCTC 133682 >seq1 Length=1046041 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||| || |||| | ||| ||| Sbjct 845815 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 845756 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| |||||||| ||||| || || || || || || ||| Sbjct 845755 AGCTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGA 845696 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || ||||| || || || ||||| ||| Sbjct 845695 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTA 845636 Query 134685 CCGGTT 134690 || ||| Sbjct 845635 CCTGTT 845630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505336532918360